Modules:Plastimatch - Revision history

NadyaSh at 21:41, 14 February 2011

2011-02-14T21:41:05Z

2011-02-14T21:34:09Z

Undo revision 19135 by NadyaSh (Talk)

2011-02-14T21:31:16Z

2010-06-08T20:52:14Z

Module Description

2010-06-08T20:48:45Z

Module Description

2010-06-08T20:45:18Z

Usage

2010-06-08T20:43:48Z

Development

2010-06-08T20:43:32Z

More Information

2010-06-08T20:43:01Z

Module Description

2010-06-08T20:42:45Z

Development

@@ Line 2: / Line 2: @@
 __NOTOC__
-===Plastimatch===
+===Plastimatch > B-spline Deformable Registartion===
 {|

@@ Line 18: / Line 18: @@
 ===Authors, Collaborators & Contact===
 * Authors: See COPYRIGHT.TXT contained within the package
-* Contact: Nadya Shusharina, Department of Radiation Oncology, Massachusetts General Hospital (nshusharina@partners.org)
+* Contact: Greg Sharp, Department of Radiation Oncology, Massachusetts General Hospital (gcsharp@partners.org)
 * Web page: http://plastimatch.org
 ===Module Description===
-This is the plastimatch landmark-based deformable image registration module.  The intended application of this method is rapid, interactive correction of registration failures with a small number of mouse clicks. Compared to other landmark-based methods, the plastimatch registration method might offer:
+This is the plastimatch automatic (B-spline) deformable image registration module.  It includes a multi-stage, multi-resolution pipeline, as well as multicore and GPU acceleration.  Compared to other B-spline methods in 3d slicer, the plastimatch registration method might offer:
-# both local and global registartion
+# superior accuracy for CT-CT (or CT-CBCT) registration
-# regularization of the deformation fiels
+# faster results for MSE registration
 Examples of how this module is being used:

@@ Line 18: / Line 18: @@
 ===Authors, Collaborators & Contact===
 * Authors: See COPYRIGHT.TXT contained within the package
-* Contact: Greg Sharp, Department of Radiation Oncology, Massachusetts General Hospital (gcsharp@partners.org)
+* Contact: Nadya Shusharina, Department of Radiation Oncology, Massachusetts General Hospital (nshusharina@partners.org)
 * Web page: http://plastimatch.org
 ===Module Description===
-This is the plastimatch automatic (B-spline) deformable image registration module.  It includes a multi-stage, multi-resolution pipeline, as well as multicore and GPU acceleration.  Compared to other B-spline methods in 3d slicer, the plastimatch registration method might offer:
+This is the plastimatch landmark-based deformable image registration module.  The intended application of this method is rapid, interactive correction of registration failures with a small number of mouse clicks. Compared to other landmark-based methods, the plastimatch registration method might offer:
-# superior accuracy for CT-CT (or CT-CBCT) registration
+# both local and global registartion
-# faster results for MSE registration
+# regularization of the deformation fiels
 Examples of how this module is being used:

@@ Line 23: / Line 23: @@
 ===Module Description===
-This is the plastimatch automatic (B-spline) deformable image registration module.
+This is the plastimatch automatic (B-spline) deformable image registration module.  It includes a multi-stage, multi-resolution pipeline, as well as multicore and GPU acceleration.  Compared to other B-spline methods in 3d slicer, the plastimatch registration method might offer:
-# superior accuracy for CT-CT registration
+# superior accuracy for CT-CT (or CT-CBCT) registration
 # faster results for MSE registration
-However, to date there has been no clear comparisons between the methods.
+However, to date there have been no rigorous comparisons of the various 3D Slicer registration methods.
-Examples of how this module is used:
+Examples of how this module is being used:
 * Intra-subject registration for adaptive radiotherapy

← Older revision		Revision as of 20:48, 8 June 2010
Line 22:		Line 22:

	===Module Description===		===Module Description===
		+
		+	This is the plastimatch automatic (B-spline) deformable image registration module.
		+	Compared to other B-spline methods in 3d slicer, the plastimatch registration method might offer:
		+
		+	# superior accuracy for CT-CT registration
		+	# faster results for MSE registration
		+
		+	However, to date there has been no clear comparisons between the methods.
		+
		+	Examples of how this module is used:
		+
		+	* Intra-subject registration for adaptive radiotherapy
		+	* Inter-subject registration for automatic segmentation

	== Usage ==		== Usage ==

← Older revision		Revision as of 20:45, 8 June 2010
Line 24:		Line 24:

	== Usage ==		== Usage ==
−
−	~~===Use Cases, Examples===~~
−
−	~~Plastimatch contains three separate plugins. This wiki page documents the automatic B-Spline deformable registration plugin.~~
−
−	* Automatic (B-spline) deformable image registration
−	Compared to other methods, the plastimatch registration method probably offers (1) superior accuracy for CT-CT registration, and (2) faster results. However, the plastimatch transform is not compatible within the MRML scene, so you cannot easily use it together with other plugins.
−
−	* Manual (landmark) deformable image registration
−	~~If you need to manually adjust your registration results, this is the tool for you! You can define a small number of corresponding landmarks (as few as one or two) to repair minor misregistrations.~~
−	~~However, the plastimatch transform is not compatible within the MRML scene, so you cannot easily use it together with other plugins.~~
−
−	* DICOM-RT structure set import
−	~~This handy plugin will load a DICOM-RT structure set, and render it as a labelmap.~~
−
−	~~Examples of the module in use:~~
−
−	* Intra-subject registration for adaptive radiotherapy
−	* Inter-subject registration for automatic segmentation

	===Tutorials===		===Tutorials===

← Older revision		Revision as of 20:43, 8 June 2010
Line 118:		Line 118:

	== More Information ==		== More Information ==
		+
		+	===About plastimatch===
		+	Plastimatch is an open source software for deformable image registration. It is designed for high-performance volumetric registration of medical images, such as X-ray computed tomography (CT), magnetic resonance imaging (MRI), and positron emission tomography (PET). Software features include:
		+
		+	* B-spline method for deformable image registration (GPU and multicore accelerated)
		+	* Demons method for deformable image registration (GPU accelerated)
		+	* ITK-based algorithms for translation, rigid, affine, demons, and B-spline registration
		+	* Pipelined, multi-stage registration framework with seamless conversion between most algorithms and transform types
		+	* Landmark-based deformable registration using thin-plate splines for global registration
		+	* Landmark-based deformable registration using radial basis functions for local corrections
		+	* Broad support for 3D image file formats (using ITK), including Dicom, Nifti, NRRD, MetaImage, and Analyze
		+	* Dicom and DicomRT import and export
		+	* XiO import and export
		+	* Plugins for 3D Slicer
		+
		+	Plastimatch also features two handy utilities which are not directly related to image registration:
		+
		+	* FDK cone-beam CT reconstruction (GPU and multicore accelerated)
		+	* Digitally reconstructed radiograph (DRR) generation (GPU and multicore accelerated)

	===Acknowledgment===		===Acknowledgment===