Modules:OrientImages-Documentation-3.4 - Revision history

Fedorov: /* Quick Tour of Features and Use */

2009-10-29T18:46:46Z

Quick Tour of Features and Use

Marianna at 20:22, 26 May 2009

2009-05-26T20:22:02Z

Lorensen: /* Source code & documentation */

2009-02-07T17:20:42Z

Source code & documentation

Lorensen: /* Source code & documentation */

2009-02-07T17:17:33Z

Source code & documentation

Lorensen at 16:26, 7 February 2009

2009-02-07T16:26:27Z

Lorensen: New page: Return to Slicer 3.4 Documentation NOTOC ===Module Name=== MyModule {| |Caption 1 |[[Image:screenshotBlank.png|thumb|2...

2009-02-07T16:12:35Z

New page: Return to Slicer 3.4 Documentation __NOTOC__ ===Module Name=== MyModule {| |thumb|280px|Caption 1 |[[Image:screenshotBlank.png|thumb|2...

New page

[[Documentation-3.4|Return to Slicer 3.4 Documentation]]
__NOTOC__
===Module Name===
MyModule

{|
|[[Image:screenshotBlank.png|thumb|280px|Caption 1]]
|[[Image:screenshotBlank.png|thumb|280px|Caption 2]]
|[[Image:screenshotBlank.png|thumb|280px|Caption 3]]
|}

== General Information ==
===Module Type & Category===

Type: CLI

Category: Base or (Filtering, Registration, ''etc.'')

===Authors, Collaborators & Contact===
* Author: Bill Lorensen
* Contact: bill.lorensen at gmail.com

===Module Description===
Overview of what the module does goes here.

== Usage ==

===Examples, Use Cases & Tutorials===

* Note use cases for which this module is especially appropriate, and/or link to examples.
* Link to examples of the module's use
* Link to any existing tutorials

===Quick Tour of Features and Use===
List all the panels in your interface, their features, what they mean, and how to use them. For instance:

* '''Input panel:'''
* '''Parameters panel:'''
* '''Output panel:'''
* '''Viewing panel:'''

== Development ==

===Dependencies===

Other modules or packages that are required for this module's use.

===Known bugs===

Follow this [http://na-mic.org/Mantis/main_page.php link] to the Slicer3 bug tracker.

===Usability issues===

Follow this [http://na-mic.org/Mantis/main_page.php link] to the Slicer3 bug tracker. Please select the '''usability issue category''' when browsing or contributing.

===Source code & documentation===

Source Code: [http://www.na-mic.org/ViewVC/index.cgi/trunk/Applications/CLI/]

Documentation:

== More Information ==

===Acknowledgment===
This work is part of the National Alliance for Medical Image
Computing (NAMIC), funded by the National Institutes of Health
through the NIH Roadmap for Medical Research, Grant U54 EB005149.
Information on the National Centers for Biomedical Computing
can be obtained from [http://www.ncbcs.org/ National Centers for Biomedical Computing].

===References===

@@ Line 58: / Line 58: @@
 Source Code: [http://www.na-mic.org/ViewVC/index.cgi/trunk/Applications/CLI/OrientImage.cxx?view=annotate OrientImage.cxx]
 XML Description: [http://www.na-mic.org/ViewVC/index.cgi/trunk/Applications/CLI/OrientImage.xml?view=co Orient orientImage.xml]
 Usage:
 <pre>
-   ./OrientImage  [--processinformationaddress <std::string>] [--xml]
+./OrientImage  [--processinformationaddress <std::string>] [--xml]
-                  [--echo] [-o <Axial|Coronal|Sagittal|RIP|LIP|RSP|LSP|RIA
+               [--echo] [-o <Axial|Coronal|Sagittal|RIP|LIP|RSP|LSP|RIA
-                  |LIA|RSA|LSA|IRP|ILP|SRP|SLP|IRA|ILA|SRA|SLA|RPI|LPI|RAI
+               |LIA|RSA|LSA|IRP|ILP|SRP|SLP|IRA|ILA|SRA|SLA|RPI|LPI|RAI
-                  |LAI|RPS|LPS|RAS|LAS|PRI|PLI|ARI|ALI|PRS|PLS|ARS|ALS|IPR
+               |LAI|RPS|LPS|RAS|LAS|PRI|PLI|ARI|ALI|PRS|PLS|ARS|ALS|IPR
-                  |SPR|IAR|SAR|IPL|SPL|IAL|SAL|PIR|PSR|AIR|ASR|PIL|PSL|AIL
+               |SPR|IAR|SAR|IPL|SPL|IAL|SAL|PIR|PSR|AIR|ASR|PIL|PSL|AIL
-                  |ASL>] [--] [--version] [-h] <std::string> <std::string>
+               |ASL>] [--] [--version] [-h] <std::string> <std::string>
 Where:
-   --processinformationaddress <std::string>
+--processinformationaddress <std::string>
-     Address of a structure to store process information (progress, abort,
+  Address of a structure to store process information (progress, abort,
-     etc.). (default: 0)
+  etc.). (default: 0)
-   --xml
+--xml
-     Produce xml description of command line arguments (default: 0)
+  Produce xml description of command line arguments (default: 0)
-   --echo
+--echo
-     Echo the command line arguments (default: 0)
+  Echo the command line arguments (default: 0)
-   -o <Axial|Coronal|Sagittal|RIP|LIP|RSP|LSP|RIA|LIA|RSA|LSA|IRP|ILP|SRP
+-o <Axial|Coronal|Sagittal|RIP|LIP|RSP|LSP|RIA|LIA|RSA|LSA|IRP|ILP|SRP
-      |SLP|IRA|ILA|SRA|SLA|RPI|LPI|RAI|LAI|RPS|LPS|RAS|LAS|PRI|PLI|ARI|ALI
+   |SLP|IRA|ILA|SRA|SLA|RPI|LPI|RAI|LAI|RPS|LPS|RAS|LAS|PRI|PLI|ARI|ALI
-      |PRS|PLS|ARS|ALS|IPR|SPR|IAR|SAR|IPL|SPL|IAL|SAL|PIR|PSR|AIR|ASR|PIL
+   |PRS|PLS|ARS|ALS|IPR|SPR|IAR|SAR|IPL|SPL|IAL|SAL|PIR|PSR|AIR|ASR|PIL
-      |PSL|AIL|ASL>,  --orientation <Axial|Coronal|Sagittal|RIP|LIP|RSP|LSP
+   |PSL|AIL|ASL>,  --orientation <Axial|Coronal|Sagittal|RIP|LIP|RSP|LSP
-      |RIA|LIA|RSA|LSA|IRP|ILP|SRP|SLP|IRA|ILA|SRA|SLA|RPI|LPI|RAI|LAI|RPS
+   |RIA|LIA|RSA|LSA|IRP|ILP|SRP|SLP|IRA|ILA|SRA|SLA|RPI|LPI|RAI|LAI|RPS
-      |LPS|RAS|LAS|PRI|PLI|ARI|ALI|PRS|PLS|ARS|ALS|IPR|SPR|IAR|SAR|IPL|SPL
+   |LPS|RAS|LAS|PRI|PLI|ARI|ALI|PRS|PLS|ARS|ALS|IPR|SPR|IAR|SAR|IPL|SPL
-      |IAL|SAL|PIR|PSR|AIR|ASR|PIL|PSL|AIL|ASL>
+   |IAL|SAL|PIR|PSR|AIR|ASR|PIL|PSL|AIL|ASL>
-     Orientation choices (default: LPS)
+  Orientation choices (default: LPS)
-   --,  --ignore_rest
+--,  --ignore_rest
-     Ignores the rest of the labeled arguments following this flag.
+  Ignores the rest of the labeled arguments following this flag.
-   --version
+--version
-     Displays version information and exits.
+  Displays version information and exits.
-   -h,  --help
+-h,  --help
-     Displays usage information and exits.
+  Displays usage information and exits.
-   <std::string>
+<std::string>
-     (required)  Input volume 1
+  (required)  Input volume 1
-   <std::string>
+<std::string>
-     (required)  The oriented volume
+  (required)  The oriented volume
-   Description: Orients an output volume. Rearranges the slices in a volume
+Description: Orients an output volume. Rearranges the slices in a volume
-   accoording to the selected orientation. The resulting volume will cover
+accoording to the selected orientation. The resulting volume will cover
-   the original volume.
+the original volume.
-   Author(s): Bill Lorensen
+Author(s): Bill Lorensen
-   Acknowledgements: This work is part of the National Alliance for Medical
+Acknowledgements: This work is part of the National Alliance for Medical
-   Image Computing (NAMIC), funded by the National Institutes of Health
+Image Computing (NAMIC), funded by the National Institutes of Health
-   through the NIH Roadmap for Medical Research, Grant U54 EB005149.
+through the NIH Roadmap for Medical Research, Grant U54 EB005149.
 </pre>

@@ Line 41: / Line 41: @@
 * '''Output panel:'''
 * '''Viewing panel:'''
 == Development ==

@@ Line 1: / Line 1: @@
 [[Documentation-3.4|Return to Slicer 3.4 Documentation]]
 __NOTOC__
 ===Module Name===

@@ Line 2: / Line 2: @@
 __NOTOC__
 ===Module Name===
-MyModule
+Orient Images
 {|
@@ Line 57: / Line 57: @@
 ===Source code & documentation===
-Source Code: [http://www.na-mic.org/ViewVC/index.cgi/trunk/Applications/CLI/]
+Source Code: [http://www.na-mic.org/ViewVC/index.cgi/trunk/Applications/CLI/OrientImage.cxx?view=annotate Orient Images]
 Documentation:

Modules:OrientImages-Documentation-3.4 - Revision history

Fedorov: /* Quick Tour of Features and Use */

Marianna at 20:22, 26 May 2009

Lorensen: /* Source code & documentation */

Lorensen: /* Source code & documentation */

Lorensen at 16:26, 7 February 2009

Lorensen: New page: Return to Slicer 3.4 Documentation __NOTOC__ ===Module Name=== MyModule {| |Caption 1 |[[Image:screenshotBlank.png|thumb|2...

Lorensen: New page: Return to Slicer 3.4 Documentation NOTOC ===Module Name=== MyModule {| |Caption 1 |[[Image:screenshotBlank.png|thumb|2...