Modules:OpenIGTLinkIF-Documentation-3.4 - Revision history

Grundlett: Text replacement - "\[http:\/\/www\.slicer\.org\/slicerWiki\/index\.php\/([^ ]+) ([^]]+)]" to "$2"

2019-11-27T02:20:59Z

Text replacement - "\[http:\/\/www\.slicer\.org\/slicerWiki\/index\.php\/([^ ]+) ([^]]+)]" to "$2"

2010-04-08T19:21:59Z

2010-04-08T19:21:34Z

2010-01-15T22:15:35Z

Source code & documentation

2009-11-30T20:39:17Z

Authors, Collaborators & Contact

2009-09-21T16:55:07Z

Step 5: Reslice in Axial/Sagittal/Coronal

2009-06-18T19:01:11Z

Usage

2009-06-18T18:58:45Z

Quick Tour of Features and Use

2009-06-18T18:56:14Z

Step 5: Connecting the Receive Client

2009-06-18T18:52:00Z

Step 4: Export configuration

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 ====Step 2: 3D Slicer====
-The OpenIGTLink Interface module is included in the nightly release. The binaries can be found at [http://www.slicer.org/DownloadSlicer.php/Nightly Download page for Slicer Nightly Build]. If you interested in building by your self, please see [http://www.slicer.org/slicerWiki/index.php/Slicer3:Build_Instructions Bulid Instructions].
+The OpenIGTLink Interface module is included in the nightly release. The binaries can be found at [http://www.slicer.org/DownloadSlicer.php/Nightly Download page for Slicer Nightly Build]. If you interested in building by your self, please see [[Slicer3:Build_Instructions|Bulid Instructions]].
 ====Step 3: Connecting the Tracker Client====

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-[[Documentation-3.6|Return to Slicer 3.4 Documentation]]
+[[Documentation-3.4|Return to Slicer 3.4 Documentation]]
-[[Announcements:Slicer3.6#Highlights|Gallery of New Features]]
+[[Announcements:Slicer3.4#Highlights|Gallery of New Features]]
 __NOTOC__

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-[[Documentation-3.4|Return to Slicer 3.4 Documentation]]
+[[Documentation-3.6|Return to Slicer 3.4 Documentation]]
-[[Announcements:Slicer3.4#Highlights|Gallery of New Features]]
+[[Announcements:Slicer3.6#Highlights|Gallery of New Features]]
 __NOTOC__

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 See [http://viewvc.slicer.org/viewcvs.cgi/trunk/Modules/OpenIGTLinkIF/ ViweCV page] for the source code.
-[http://www.na-mic.org/Slicer/Documentation/Slicer3/html/classes.html Links] to documentation generated by doxygen.
+[http://www.na-mic.org/Slicer/Documentation/Slicer3-doc/html/classes.html Links] to documentation generated by doxygen.
 == More Information ==

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 ===Authors, Collaborators & Contact===
-* [http://www.na-mic.org/Wiki/index.php/User:Tokuda Junichi Tokuda]: SPL, Brigham and Women's Hospital
+* [http://www.na-mic.org/Wiki/index.php/User:Tokuda Junichi Tokuda, Ph.D.]: SPL, Brigham and Women's Hospital
-* Nobuhiko Hata: SPL, Brigham and Women's Hospital
+* Haiying Liu, Brigham and Women's Hospital
 ===Module Description===

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 ====Step 5: Reslice in Axial/Sagittal/Coronal====
-Goto "Visualization / Slice Control" section in the OpenIGTLink IF module and choose "Locator" from image plane driver drop-down menu (or just simply press "Locator All" button to turn all menus to Locator. You will see the section(s) of the volumes at the needle tip in Axial / Sagittal / Coronal plane in the 2D viwer(s). You may also be able to see them in the 3D space by clicking the "eye" buttons in the 2D viewer panels. (NOTE: Reslicing function usually increase the CPU load. Low tracking frame rate (say 1-2 fps) is recommended.)
+Goto "Visualization / Slice Control" section in the OpenIGTLink IF module and choose "Locator" from image plane driver drop-down menu (or just simply press "Locator All" button to turn all menus to Locator. You will see the section(s) of the volumes at the needle tip in Axial / Sagittal / Coronal plane in the 2D viwer(s). You may also be able to see them in the 3D space by clicking the "eye" buttons in the 2D viewer panels. (NOTE: Reslicing function usually increases the CPU load. Low tracking frame rate (say 1-2 fps) is recommended.)
 [[Image:Slicer3_OpenIGTLinkIF__VolumeReslice1.png|thumb|center|600px|]]

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 * '''Neurosurgical Robot Project'''(Nagoya Institute of Technology, Japan)
 **The 3D Slicer was connected to the optical tracking system (Optotrak, Northern Digital Inc.) to acquire current position of the end-effector of the robot.
 ===Tutorial 1: Importing Tracking Data from Tracking Simulator===
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 <BR>
 == Development ==

← Older revision		Revision as of 18:58, 18 June 2009
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	<BR>		<BR>

−	~~===Quick Tour of Features and Use===~~
−	* '''Connectors:'''
−	** Connector panel is used to add, delete and edit connectors.
−	* '''Data I/O Configurations:'''
−	* '''Visualization / Slice Control:'''

−	~~<br>~~

	== Development ==		== Development ==

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 Open a terminal window, go to the directory that contains the ReceiveClient command and run the following command:
-   # ./ReceveClient <hostname> <port number>
+   # ./ReceiveClient <hostname> <port number>
 The default port number is 18944.
 If the client software successfully connect to 3D Slicer, the status in the OpenIGTLink IF module changes to "Connected."

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 The Data I/O Setting shows a list of connectors in a tree widget. In this tree, names of the connecters are listed as second-level branches. Each connector has "IN" and "OUT" branches to bundle MRML nodes that hold importing and exporting data. The OpenIGTLink IF module monitors MRML nodes listed in "OUT branches, and if a node is updated, the OpenIGTLink detects the update, generates OpenIGTLink message and send it through the connector. So if you want to export MRML data from Slicer through a specific connector, you simply add the MRML node in the "OUT" branch of the connector.
-If you successfully follow the previous step of this tutorial, you will see the name of the connector created in the previous step (Step 3) in the tree. To add a MRML node to the "OUT" branch, right-click the "OUT" branch to pull down a menu of currently available MRML node for exporting in the scene. You can choose one of them by clinking an item on the menu.
+If you successfully follow the previous step of this tutorial, you will see the name of the connector created in the previous step (Step 3) in the tree. To add a MRML node to the "OUT" branch, right-click the "OUT" branch to pull down a menu of currently available MRML node for exporting in the scene (See the right screenshot bellow). You can choose one of them by clinking an item on the menu.
 <center>
 {|