Modules:LabelStatistics-Documentation-3.4 - Revision history

Nicole: /* Source code & documentation */

2010-01-15T22:11:14Z

Source code & documentation

Nicole: /* Source code & documentation */

2010-01-15T22:10:30Z

Source code & documentation

Marianna at 20:02, 26 May 2009

2009-05-26T20:02:53Z

Pieper: New page: Return to Slicer 3.4 Documentation NOTOC ===Module Name=== Label Statistics {| |[[Image:LabelStatistics3.4.png|thumb|280px|Label Statistics for a binary label ma...

2009-03-01T21:01:27Z

New page: Return to Slicer 3.4 Documentation __NOTOC__ ===Module Name=== Label Statistics {| |[[Image:LabelStatistics3.4.png|thumb|280px|Label Statistics for a binary label ma...

New page

[[Documentation-3.4|Return to Slicer 3.4 Documentation]]
__NOTOC__
===Module Name===
Label Statistics

{|
|[[Image:LabelStatistics3.4.png|thumb|280px|Label Statistics for a binary label map over an MR image. Note the Min and Max values (the label map was created using a thresholding operation)]]
|}

== General Information ==
===Module Type & Category===

Type: Base

Category: Statistics

===Authors, Collaborators & Contact===
* Author: Katharina Quintus, BWH, Steve Pieper, Isomics
* Contact: pieper@bwh.harvard.edu

===Module Description===
Calculate image and volume properties using a label map and a gray scale image.

== Usage ==

===Examples, Use Cases & Tutorials===

===Quick Tour of Features and Use===

The module is fairly simple. Just select a background volume and a label volume (for example, as created using the [[Modules:Editor-Documentation-3.4|Editor Module]]) and click Apply.

The volumes of the table show:

* '''Label''' there is one row for each unique value in the label volume
* '''Count''' is the number of pixels in the label volume that have this value
* '''Volume''' is the product of the pixel spacings (volume per pixel) times the '''Count'''
* '''Min, Max, Mean, StdDev''' Statistics on the grayscale pixel values at the locations that correspond to the label value.

== Development ==

===Dependencies===

Other modules or packages that are required for this module's use.

===Known bugs===

Follow this [http://na-mic.org/Mantis/main_page.php link] to the Slicer3 bug tracker.

===Usability issues===

Follow this [http://na-mic.org/Mantis/main_page.php link] to the Slicer3 bug tracker. Please select the '''usability issue category''' when browsing or contributing.

===Source code & documentation===

== More Information ==

===Acknowledgment===
This work is part of the National Alliance for Medical Image
Computing (NAMIC), funded by the National Institutes of Health
through the NIH Roadmap for Medical Research, Grant U54 EB005149.
Information on the National Centers for Biomedical Computing
can be obtained from [http://www.ncbcs.org/ National Centers for Biomedical Computing].

===References===

@@ Line 61: / Line 61: @@
 * [http://www.na-mic.org/Slicer/Documentation/Slicer3-doc/html/classvtkLabelStatisticsGUI.html vtkLabelStatisticsGUI]
 * [http://www.na-mic.org/Slicer/Documentation/Slicer3-doc/html/classvtkLabelStatisticsLogic.html vtkLabelStatisticsLogic]
 == More Information ==

← Older revision		Revision as of 22:10, 15 January 2010
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	===Source code & documentation===		===Source code & documentation===
		+
		+	[http://viewvc.slicer.org/viewcvs.cgi/trunk/Modules/Statistics/LabelStatistics/ LabelStatistics source files]
		+
		+	Doxygen documentation:
		+	* [http://www.na-mic.org/Slicer/Documentation/Slicer3-doc/html/classvtkLabelStatisticsGUI.html vtkLabelStatisticsGUI]
		+	* [http://www.na-mic.org/Slicer/Documentation/Slicer3-doc/html/classvtkLabelStatisticsLogic.html vtkLabelStatisticsLogic]

	== More Information ==		== More Information ==

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 [[Documentation-3.4|Return to Slicer 3.4 Documentation]]
 __NOTOC__
 ===Module Name===
@@ Line 17: / Line 19: @@
 ===Authors, Collaborators & Contact===
 * Author: Katharina Quintus, BWH, Steve Pieper, Isomics
-* Contact: pieper@bwh.harvard.edu
+* Contact: pieper at bwh.harvard.edu
 ===Module Description===

Modules:LabelStatistics-Documentation-3.4 - Revision history

Nicole: /* Source code & documentation */

Nicole: /* Source code & documentation */

Marianna at 20:02, 26 May 2009

Pieper: New page: Return to Slicer 3.4 Documentation __NOTOC__ ===Module Name=== Label Statistics {| |[[Image:LabelStatistics3.4.png|thumb|280px|Label Statistics for a binary label ma...

Pieper: New page: Return to Slicer 3.4 Documentation NOTOC ===Module Name=== Label Statistics {| |[[Image:LabelStatistics3.4.png|thumb|280px|Label Statistics for a binary label ma...