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2013-06-14T08:04:46Z

Prepend documentation/versioncheck template. See http://na-mic.org/Mantis/view.php?id=2887

Marianna: Created page with ' {{documentation/{{documentation/version}}/TractographyColors}} {{ambox | type = protection | image =…'

2012-12-19T18:09:17Z

Created page with ' {{documentation/{{documentation/version}}/TractographyColors}}  {{ambox | type = protection | image =…'

New page

{{documentation/{{documentation/version}}/TractographyColors}}


{{ambox
| type = protection
| image = [[File:InProgress.png|40px|alt=Work in progress]]
| text = WARNING: This LUT is Work in Progress, which means:
* the label integers and values may change at any time
}}

*Standard color names and values: http://www.w3.org/TR/SVG/types.html#ColorKeywords
* [http://labelpage.halle.us/ Go here] to create a text file in Slicer LUT format.
* If changing the order of the table, the indices can be recreated with [[Slicer3:LUTs_and_Ontologies:Renumber_Script|this tcl script]].

This is the look-up table for the parcellation of the white matter of the brain.
*Authors: Ron Kikinis, Demian Wassermann, Marianna Jakab

==Lookup table==

{| class="wikitable sortable labelpage labelpagetable" border="1"
! integer_label
! text_label
! color
! notes
|-
|0
|
|style="background:rgb(0,0,0);color:white"|rgba(0,0,0,0)
|background
|-
|1
|corpus callosum
|style="background:rgb(255, 215, 0)"|rgb(255, 215, 0)
|CC
|-
|2
|genu of the corpus callosum
|style="background:rgb(225, 215, 0)"|rgb(225, 215, 0)
|CC genu
|-
|3
|body of the corpus callosum
|style="background:rgb(195, 215, 0)"|rgb(195, 215, 0)
|CC body
|-
|4
|splenium of the corpus callosum
|style="background:rgb(165, 215, 0)"|rgb(165, 215, 0)
|CC splenium
|-
|5
|dorsal hippocampal comissure
|style="background:rgb(122, 150, 170)"|rgb(122, 120, 170)
|DHC
|-
|6
|anterior comissure
|style="background:rgb(92, 140, 170)"|rgb(92, 140, 170)
|AC
|-
|7
|posterior comissure
|style="background:rgb(62, 160, 170)"|rgb(62, 160, 170)
|PC
|-
|8
|forniceal comissure
|style="background:rgb( 32, 180, 170)"|rgb( 32, 180, 170)
|FC
|-
|9
|pontine tract
|style="background:rgb(92, 161, 124)"|rgb(92, 161, 124)
|PT
|-
|10
|short cortico-cortical pathway
|style="background:rgb(83,146,164)"|rgb(83,146,164)
|U
|-
|11
|right arcuate fasicle
|style="background:rgb(221,130,101)"|rgb(221,130,101)
|r AF
|-
|12
|left arcuate fasicle
|style="background:rgb(216,101,79)"|rgb(216,101,79)
|l AF
|-
|13
|right inferior occipito-frontal fasicle
|style="background:rgb(144,238,144)"|rgb(144,238,144)
|r IOFF
|-
|14
|left inferior occipito-frontal fasicle
|style="background:rgb( 60, 179, 113)"|rgb( 60, 179, 113)
|l IOFF
|-
|15
|right inferior longitudinal fasicle
|style="background:rgb(220,245,20)"|rgb(220,245,20)
|r ILF
|-
|16
|left inferior longitudinal fasicle
|style="background:rgb(176, 176, 8)"|rgb(176, 176, 8)
|l ILF
|-
|17
|right uncinate fasicle
|style="background:rgb(255,250,220)"|rgb(255,250,220)
|r UF
|-
|18
|left uncinate fasicle
|style="background:rgb(230,220,70)"|rgb(230,220,70)
|l UF
|-
|19
|right cortico-spinal tract
|style="background:rgb(230, 230, 250)"|rgb(230, 230, 250)
|r CST
|-
|20
|left cortico-spinal tract
|style="background:rgb(200,200,235)"|rgb(200,200,235)
|l CST
|-
|21
|right optic radiation
|style="background:rgb(135, 206, 235)"|rgb(135, 206, 235)
|r OR
|-
|22
|left optic radiation
|style="background:rgb(0,151,206)"|rgb(0,151,206)
|l OR
|-
|23
|right cingulum bundle
|style="background:rgb(255, 99, 71)"|rgb(255, 99, 71)
|r CB
|-
|24
|left cingulum bundle
|style="background:rgb(250, 90, 90)"|rgb(250, 90, 90)
|l CB
|-
|25
|right superior longitudinal fasicle I
|style="background:rgb(183,214,211)"|rgb(183,214,211)
|r SLF I
|-
|26
|left superior longitudinal fasicle I
|style="background:rgb(152,189,207)"|rgb(152,189,207)
|l SLF I
|-
|27
|right superior longitudinal fasicle II
|style="background:rgb(178,212,242)"|rgb(178,212,242)
|r SLF II
|-
|28
|left superior longitudinal fasicle II
|style="background:rgb(111,184,210)"|rgb(111,184,210)
|l SLF II
|-
|29
|right superior longitudinal fasicle III
|style="background:rgb(111,197,131)"|rgb(111,197,131)
|r SLF III
|-
|30
|left superior longitudinal fasicle III
|style="background:rgb(68,172,100)"|rgb(68,172,100)
|l SLF III
|-
|31
|right middle longitudinal fasicle
|style="background:rgb(85,188,255)"|rgb(85,188,255)
|r MdLF
|-
|32
|left middle longitudinal fasicle
|style="background:rgb( 65, 105, 225)"|rgb( 65, 105, 225)
|l MdLF
|-
|33
|right extreme capsule
|style="background:rgb(196, 110, 0)"|rgb(196, 110, 0)
|r EmC
|-
|34
|left extreme capsule
|style="background:rgb(176, 90, 50)"|rgb(160, 82, 45)
|l EmC
|-
|35
|right superior occipito-frontal fasicle
|style="background:rgb(216,191,216)"|rgb(216,191,216)
|r SOFF
|-
|36
|left superior occipito-frontal fasicle
|style="background:rgb(221, 160, 221)"|rgb(221, 160, 221)
|l SOFF
|-
|37
|right cortico-thalamical pathways
|style="background:rgb(245, 222, 179)"|rgb(245, 222, 179)
|r CT
|-
|38
|left cortico-thalamical pathways
|style="background:rgb(210, 180, 140)"|rgb(210, 180, 140)
|l CT
|-
|39
|right cortico-striatal pathways
|style="background:rgb(244, 164, 96)"|rgb(244, 164, 96)
|r CS
|-
|40
|left cortico-striatal pathways
|style="background:rgb(177,122,101)"|rgb(177,122,101)
|l CS
|-
|41
|right cortico-pontine projections
|style="background:rgb(250,250,225)"|rgb(250,250,225)
|r CP
|-
|42
|left cortico-pontine projections
|style="background:rgb(200,200,200)"|rgb(200,200,200)
|l CP
|-
|43
|peritumoral fibers
|style="background:rgb(100, 177, 198)"|rgb(100, 177, 198)
|PF
|-
|44
|
|style="background:rgb(255,255,255)"|rgb(255,255,255)
|
|-
|45
|
|style="background:rgb(255,255,255)"|rgb(255,255,255)
|
|-
|46
|
|style="background:rgb(255,255,255)"|rgb(255,255,255)
|
|-
|47
|
|style="background:rgb(255,255,255)"|rgb(255,255,255)
|
|-
|48
|
|style="background:rgb(255,255,255)"|rgb(255,255,255)
|
|-
|49
|
|style="background:rgb(255,255,255)"|rgb(255,255,255)
|
|-
|50
|
|style="background:rgb(255,255,255)"|rgb(255,255,255)
|
|-
|51
|
|style="background:rgb(255,255,255)"|rgb(255,255,255)
|
|-
|52
|
|style="background:rgb(255,255,255)"|rgb(255,255,255)
|
|-
|53
|
|style="background:rgb(255,255,255)"|rgb(255,255,255)
|
|-
|54
|
|style="background:rgb(255,255,255)"|rgb(255,255,255)
|
|-
|55
|
|style="background:rgb(255,255,255)"|rgb(255,255,255)
|
|-
|56
|
|style="background:rgb(255,255,255)"|rgb(255,255,255)
|
|-
|57
|
|style="background:rgb(255,255,255)"|rgb(255,255,255)
|
|-
|58
|
|style="background:rgb(255,255,255)"|rgb(255,255,255)
|
|-
|59
|
|style="background:rgb(255,255,255)"|rgb(255,255,255)
|
|-
|60
|
|style="background:rgb(255,255,255)"|rgb(255,255,255)
|
|-
|61
|Probe 1
|style="background:rgb(252,115,105)"|rgb(252,115,105)
|P1
|-
|62
|Probe 2
|style="background:rgb(222,115,105)"|rgb(222,115,105)
|P2
|-
|63
|Probe 3
|style="background:rgb(192,115,105)"|rgb(192,115,105)
|P3
|-
|64
|Probe 4
|style="background:rgb(162,115,105)"|rgb(162,115,105)
|P4
|}

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Documentation/Nightly/SlicerApplication/LookupTables/TractographyColors - Revision history

UpdateBot: Prepend documentation/versioncheck template. See http://na-mic.org/Mantis/view.php?id=2887

Marianna: Created page with ' {{documentation/{{documentation/version}}/TractographyColors}} {{ambox | type = protection | image =…'