Fbudin at 18:55, 16 July 2014

2014-07-16T18:55:29Z

UpdateBot: Prepend documentation/versioncheck template. See http://na-mic.org/Mantis/view.php?id=2887

2013-06-14T07:55:09Z

Prepend documentation/versioncheck template. See http://na-mic.org/Mantis/view.php?id=2887

Fbudin: Created page with 'NOTOC ===MaxCurvature-Hessian=== MaxCurvature-Hessian {| |User Interface |[[Image:MaxCurvatureResults.png|thumb|280px|Output computed…'

2012-11-29T14:52:11Z

Created page with '__NOTOC__ ===MaxCurvature-Hessian=== MaxCurvature-Hessian {| |thumb|280px|User Interface |[[Image:MaxCurvatureResults.png|thumb|280px|Output computed…'

New page

__NOTOC__

===MaxCurvature-Hessian===
MaxCurvature-Hessian

{|
|[[Image:MaxCurvature.png|thumb|280px|User Interface]]
|[[Image:MaxCurvatureResults.png|thumb|280px|Output computed on a Mean Diffusivity (MD) image]]
|}

== General Information ==

===Module Type & Category===

Type: CLI

Category: Diffusion.NIRALPipeline

===Authors, Collaborators & Contact===

Author: Casey Goodlett

Contributors:

Contact: name, email

===Module Description===
{| style="color:green" border="1"
|Program title || MaxCurvature-Hessian
|-
|Program description || This program computes the Hessian of the FA image (--image). We use this scalar image as a registration input when doing DTI atlas building. For most adult FA we use a sigma of 2 whereas for neonate or primate images and sigma of 1 or 1.5 is more appropriate. For really noisy images, 2.5 - 4 can be considered. The final image (--output) shows the main feature of the input image.
|-
|Program version || 1.1.0
|-
|Program documentation-url || http://www.google.com/
|-
|}

== Usage ==

===Quick Tour of Features and Use===

A list panels in the interface, their features, what they mean, and how to use them.
{|
|
* '''''I/O''''':
** '''FA image file''' [----image] [-i]: FA Image

** '''Output file''' [----output] [-o]: Output File

** '''Scale of Gradients''' [----sigma] [-s]: Scale of Gradients ''Default value: 2''
* '''''Advanced options''''':
** '''Verbose''' [----verbose] [-v]: produce verbose output ''Default value: 0''
|[[Image:MaxCurvature.png|thumb|280px|User Interface]]
|}

== More Information ==

More information is available on the project webpage: http://www.nitrc.org/projects/dtiprocess

===Acknowledgment===

Hans Johnson(1,3,4); Kent Williams(1); (1=University of Iowa Department of Psychiatry, 3=University of Iowa Department of Biomedical Engineering, 4=University of Iowa Department of Electrical and Computer Engineering) provided conversions to make DTIProcess compatible with Slicer execution, and simplified the stand-alone build requirements by removing the dependancies on boost and a fortran compiler.

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Documentation/Nightly/Modules/maxcurvature - Revision history

Fbudin at 18:55, 16 July 2014

UpdateBot: Prepend documentation/versioncheck template. See http://na-mic.org/Mantis/view.php?id=2887

Fbudin: Created page with '__NOTOC__ ===MaxCurvature-Hessian=== MaxCurvature-Hessian {| |User Interface |[[Image:MaxCurvatureResults.png|thumb|280px|Output computed…'

Fbudin: Created page with 'NOTOC ===MaxCurvature-Hessian=== MaxCurvature-Hessian {| |User Interface |[[Image:MaxCurvatureResults.png|thumb|280px|Output computed…'