Documentation/Nightly/Modules/TractographyLabelMapSeeding - Revision history

Grundlett: Text replacement - "https?:\/\/(?:www|wiki)\.slicer\.org\/slicerWiki\/index\.php\/([^ ]+) " to "https://www.slicer.org/wiki/$1 "

2019-11-27T13:15:14Z

Text replacement - "https?:\/\/(?:www|wiki)\.slicer\.org\/slicerWiki\/index\.php\/([^ ]+) " to "https://www.slicer.org/wiki/$1 "

Lauren at 20:33, 6 July 2016

2016-07-06T20:33:15Z

Lauren at 16:18, 6 July 2016

2016-07-06T16:18:55Z

Zhangfanmark at 20:52, 29 June 2016

2016-06-29T20:52:29Z

UpdateBot: Prepend documentation/versioncheck template. See http://na-mic.org/Mantis/view.php?id=2887

2013-06-14T07:51:47Z

Prepend documentation/versioncheck template. See http://na-mic.org/Mantis/view.php?id=2887

JChris.FillionR: 4.1 -> Nightly

2012-08-22T16:58:42Z

4.1 -> Nightly

New page

{{documentation/{{documentation/version}}/module-header}}



{{documentation/{{documentation/version}}/module-section|Introduction and Acknowledgements}}
{{documentation/{{documentation/version}}/module-introduction-start|{{documentation/modulename}}}}
{{documentation/{{documentation/version}}/module-introduction-row}}
This work is part of the National Alliance for Medical Image Computing (NA-MIC), funded by the National Institutes of Health through the NIH Roadmap for Medical Research, Grant U54 EB005149. Information on NA-MIC can be obtained from the [http://www.na-mic.org/ NA-MIC website]. 
Author: Demian Wassermann, SPL, LMI, PNL, Brigham and Women's Hospital, Harvard Medical School 
Contact: Demian Wassermann, <email>demian@bwh.harvard.edu</email> 
Contributor1: Raúl San José-Estepar 
Contributor2: Lauren O'Donnel 
{{documentation/{{documentation/version}}/module-introduction-row}}
{{documentation/{{documentation/version}}/module-introduction-logo-gallery
|Image:Logo-splnew.jpg|Surgical Planning Laboratory
|Image:NAC-logo.png|NAC
}}
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{{documentation/{{documentation/version}}/module-section|Module Description}}
{{documentation/{{documentation/version}}/module-description}}


{{documentation/{{documentation/version}}/module-section|Use Cases}}
Most frequently used for these scenarios:

* Use Case 1:Using a label map trace all the fibers emanating from it.
* Use Case 2:Using a brain mask, perform a full brain tractography


{{documentation/{{documentation/version}}/module-section|Tutorials}}
[http://wiki.slicer.org/slicerWiki/index.php/Documentation/4.0/Training#Slicer4_Diffusion_Tensor_Imaging_Tutorial Slicer 4 Diffusion Tensor Tutorial]


{{documentation/{{documentation/version}}/module-section|Panels and their use}}
{{documentation/{{documentation/version}}/module-parametersdescription}}


{{documentation/{{documentation/version}}/module-section|Similar Modules}}
[http://wiki.slicer.org/slicerWiki/index.php/Documentation/4.0/Modules/TractographyFiducialSeeding Tractography Fiducial Seeding]

{{documentation/{{documentation/version}}/module-section|References}}
Publications related to this module go here. Links to pdfs would be useful.
For extensions: link to the source code repository and additional documentation


{{documentation/{{documentation/version}}/module-section|Information for Developers}}
{{documentation/{{documentation/version}}/module-developerinfo}}


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@@ Line 36: / Line 36: @@
 {{documentation/{{documentation/version}}/module-section|Tutorials}}
 Links to tutorials that use this module
-* Slicer4 Diffusion Tensor Imaging Tutorial: https://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Training#Slicer4_Diffusion_Tensor_Imaging_Tutorial
+* Slicer4 Diffusion Tensor Imaging Tutorial: https://www.slicer.org/wiki/Documentation/Nightly/Training#Slicer4_Diffusion_Tensor_Imaging_Tutorial <!-- ---------------------------- -->
 {{documentation/{{documentation/version}}/module-section|Panels and their use}}
 {{documentation/{{documentation/version}}/module-parametersdescription}}
@@ Line 44: / Line 42: @@
 <!-- ---------------------------- -->
 {{documentation/{{documentation/version}}/module-section|Similar Modules}}
-* TractographyInteractiveSeeding: https://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/TractographyInteractiveSeeding
+* TractographyInteractiveSeeding: https://www.slicer.org/wiki/Documentation/Nightly/Modules/TractographyInteractiveSeeding <!-- ---------------------------- -->
 {{documentation/{{documentation/version}}/module-section|References}}
 *  http://slicerdmri.github.io/

@@ Line 32: / Line 32: @@
 * Use Case 1: Using a label map, trace all the fibers emanating from it.
-* Use Case 2: Using a brain mask, perform a full brain tractography
+* Use Case 2: Using a brain mask, perform a full brain tractography.
 {{documentation/{{documentation/version}}/module-section|Tutorials}}

← Older revision		Revision as of 07:51, 14 June 2013
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 {{documentation/{{documentation/version}}/module-introduction-start|{{documentation/modulename}}}}
 {{documentation/{{documentation/version}}/module-introduction-row}}
-This work is part of the National Alliance for Medical Image Computing (NA-MIC), funded by the National Institutes of Health through the NIH Roadmap for Medical Research, Grant U54 EB005149. Information on NA-MIC can be obtained from the [http://www.na-mic.org/ NA-MIC website].<br>
-Author: Demian Wassermann, SPL, LMI, PNL, Brigham and Women's Hospital, Harvard Medical School<br>
+{{documentation/{{documentation/version}}/module-acknowledgements}}
-Contact:  Demian Wassermann, <email>demian@bwh.harvard.edu</email><br>
+Contact:  <email>slicer-users@bwh.harvard.edu</email><br>
-Contributor1: Raúl San José-Estepar<br>
+Website: http://slicerdmri.github.io/
-Contributor2: Lauren O'Donnel<br>
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 {{documentation/{{documentation/version}}/module-introduction-logo-gallery
@@ Line 31: / Line 31: @@
 Most frequently used for these scenarios:
-* Use Case 1:Using a label map trace all the fibers emanating from it.
+* Use Case 1: Using a label map, trace all the fibers emanating from it.
-* Use Case 2:Using a brain mask, perform a full brain tractography
+* Use Case 2: Using a brain mask, perform a full brain tractography
 {{documentation/{{documentation/version}}/module-section|Tutorials}}
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 <!-- ---------------------------- -->
 {{documentation/{{documentation/version}}/module-section|Similar Modules}}
-[http://wiki.slicer.org/slicerWiki/index.php/Documentation/4.0/Modules/TractographyFiducialSeeding Tractography Fiducial Seeding]
+* TractographyInteractiveSeeding: https://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/TractographyInteractiveSeeding
 <!-- ---------------------------- -->
 {{documentation/{{documentation/version}}/module-section|References}}
-Publications related to this module go here. Links to pdfs would be useful.
+*  http://slicerdmri.github.io/
 <!-- ---------------------------- -->
 {{documentation/{{documentation/version}}/module-section|Information for Developers}}
-{{documentation/{{documentation/version}}/module-developerinfo}}
+* https://github.com/SlicerDMRI