Documentation/Nightly/Modules/PETStandardUptakeValueComputation - Revision history

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2019-11-27T02:37:02Z

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2013-11-13T22:40:41Z

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2013-11-13T22:28:53Z

UpdateBot: Prepend documentation/versioncheck template. See http://na-mic.org/Mantis/view.php?id=2887

2013-06-14T08:05:10Z

Prepend documentation/versioncheck template. See http://na-mic.org/Mantis/view.php?id=2887

JChris.FillionR: 4.1 -> Nightly

2012-08-22T17:02:59Z

4.1 -> Nightly

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{{documentation/{{documentation/version}}/module-section|Introduction and Acknowledgements}}
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This work is part of the National Alliance for Medical Image Computing (NA-MIC), funded by the National Institutes of Health through the NIH Roadmap for Medical Research, Grant U54 EB005149. Information on NA-MIC can be obtained from the [http://www.na-mic.org/ NA-MIC website]. 
Author: Wendy Plesniak, SPL 
Contributor1: Ron Kikinis, SPL 
Contributor2: Nicole Aucoin, SPL 
Contact: Wendy Plesniak, <email>wjp@bwh.harvard.edu</email> 
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|Image:Logo-splnew.jpg|Surgical Planning Laboratory
|Image:NAMIC 380x463.jpg|NA-MIC
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{{documentation/{{documentation/version}}/module-section|Module Description}}
Computes the standardized uptake value based on body weight.
[[documentation/{{documentation/version}}/Modules/{{documentation/modulename}}#References|references]] gives more details on the algorithm.

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{{documentation/{{documentation/version}}/module-section|Use Cases}}

This command line module was developed for a special use case in which many different VOIs were specified on the fused structural and PET images; SUV maximum, SUV minimum, SUV mean were computed for each of these labels and the resulting quanitative measures were output to a comma-separated value (csv) file of the user's choosing.

Since various study parameters for the datasets are required for these measurements, a pointer to the DICOM directory is also provided to the computation.

This module does not visualize the functional and structural dataset. Instead, it saves all measurements to the csv file as well as showing the following quantitative measures in Slicer's interface: label name, label value, SUV max, SUV mean, SUV minimum.

{|
|[[Image:Slicer4-SUV-1.jpeg|thumb|280px|PET and CT volumes with SUV computation]]
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{{documentation/{{documentation/version}}/module-section|Tutorials}}
Links to tutorials that use this module


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|[[Image:Slicer4-SUV-2.jpeg|thumb|280px|GUI]]
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{{documentation/{{documentation/version}}/module-section|Similar Modules}}
* The Slicer3 PETCTFusion module formed the basis of this module.


{{documentation/{{documentation/version}}/module-section|References}}
Publications related to this module:


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-* [http://www.slicer.org/slicerWiki/index.php/Documentation/{{documentation/version}}/Training#Slicer4_Quantitative_Imaging_tutorial Quantitative Imaging tutorials]
+* [[Documentation/{{documentation/version}}/Training#Slicer4_Quantitative_Imaging_tutorial|Quantitative Imaging tutorials]]
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-|[[Image:Slicer4-SUV-1.jpeg|thumb|280px|PET and CT volumes with SUV computation]]
+|[[Image:Slicer43-PETStandardUptakeValueComputation.jpeg|thumb|280px|PET and CT volumes with SUV computation]]
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-* [http://www.slicer.org/slicerWiki/images/c/c6/Slicer4QuantitativeImaging.pdf Slicer 4 Quantitative Imaging Tutorial]
+* [http://www.slicer.org/slicerWiki/index.php/Documentation/{{documentation/version}}/Training#Slicer4_Quantitative_Imaging_tutorial Quantitative Imaging tutorials]
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 Information on NA-MIC can be obtained from the [http://www.na-mic.org/ NA-MIC website].<br>
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