Documentation/Nightly/Modules/DoseAccumulation - Revision history

Lasso: Moved to https://github.com/slicerrt/slicerrt

2026-01-04T20:42:15Z

Moved to https://github.com/slicerrt/slicerrt

Grundlett: Text replacement - "\[http:\/\/www\.slicer\.org\/slicerWiki\/index\.php\/([^ ]+) ([^]]+)]" to "$2"

2019-11-27T02:26:27Z

Text replacement - "\[http:\/\/www\.slicer\.org\/slicerWiki\/index\.php\/([^ ]+) ([^]]+)]" to "$2"

Hillarylia: Re-formatted Panels and their use section

2016-05-12T18:56:34Z

Re-formatted Panels and their use section

Pinter at 17:24, 21 January 2016

2016-01-21T17:24:16Z

Wangk at 17:24, 20 February 2014

2014-02-20T17:24:39Z

Pinter: Changed layout; Added back to SlicerRT home link

2013-08-26T21:50:33Z

Changed layout; Added back to SlicerRT home link

Pinter: Added OCAIRO logo

2013-08-14T19:27:32Z

Added OCAIRO logo

UpdateBot: Prepend documentation/versioncheck template. See http://na-mic.org/Mantis/view.php?id=2887

2013-06-14T07:54:11Z

Prepend documentation/versioncheck template. See http://na-mic.org/Mantis/view.php?id=2887

Pinter at 18:53, 21 April 2013

2013-04-21T18:53:39Z

Lasso at 15:06, 21 February 2013

2013-02-21T15:06:19Z

← Older revision		Revision as of 20:42, 4 January 2026
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−	~~<noinclude>{{documentation/versioncheck}}</noinclude>~~	+	Moved to https://github.com/slicerrt/slicerrt
−	~~<!-- ---------------------------- -->~~
−	~~{{documentation/{{documentation/version}}/module-header}}~~
−	~~<!-- ---------------------------- -->~~
−
−	~~<!-- ---------------------------- -->~~
−	~~{{documentation/{{documentation/version}}/module-section\|Introduction and Acknowledgements}}~~
−	~~{{documentation/{{documentation/version}}/module-introduction-start\|{{documentation/modulename}}}}~~
−	~~{{documentation/{{documentation/version}}/module-introduction-row}}~~
−	This work is part of the SparKit project, funded by An Applied Cancer Research Unit of Cancer Care Ontario with funds provided by the Ministry of Health and Long-Term Care and the Ontario Consortium for Adaptive Interventions in Radiation Oncology (OCAIRO) to provide free, open-source toolset for radiotherapy and related image-guided interventions.<br>
−	~~Author: Kevin Wang (Princess Margaret Cancer Centre)<br>~~
−	~~Contact: Kevin Wang, <email>kevin.wang@rmp.uhn.on.ca</email><br>~~
−	~~[[Documentation/Nightly/Extensions/SlicerRT\|Back to SlicerRT home]]~~
−	~~{{documentation/{{documentation/version}}/module-introduction-row}}~~
−	~~{{documentation/{{documentation/version}}/module-introduction-logo-gallery~~
−	~~\|{{collaborator\|logo\|cco}}\|{{collaborator\|longname\|cco}}~~
−	~~\|{{collaborator\|logo\|sparkit}}\|{{collaborator\|longname\|sparkit}}~~
−	~~\|{{collaborator\|logo\|ocairo}}\|{{collaborator\|longname\|ocairo}}~~
−	}}
−	~~{{documentation/{{documentation/version}}/module-introduction-end}}~~
−
−	{\|
−	\|
−
−	~~<!-- ---------------------------- -->~~
−	~~{{documentation/{{documentation/version}}/module-section\|Module Description}}~~
−	The {{documentation/modulename}} module computes accumulated dose for multiple input dose volumes as a weighted sum of the dose values. The weight of each input volume is specified in the module’s user interface. The dose volumes have to be spatially aligned prior the dose accumulation to obtain a meaningful summation. This can be achieved by utilizing image registration algorithms already available in the 3D Slicer core. First, the alignment transformation is computed by registering the anatomical volumes and then the same transformation is applied to the corresponding dose volumes.
−
−	~~<!-- ---------------------------- -->~~
−	~~{{documentation/{{documentation/version}}/module-section\|Use Cases}}~~
−	~~Evaluate total delivered dose for multiple treatment fractions.~~
−
−	~~<!-- ---------------------------- -->~~
−	~~{{documentation/{{documentation/version}}/module-section\|Tutorials}}~~
−	~~See [[Documentation/{{documentation/version}}/Extensions/SlicerRT\|SlicerRT extension page]]~~
−
−	~~<!-- ---------------------------- -->~~
−	~~{{documentation/{{documentation/version}}/module-section\|Panels and their use}}~~
−	* '''Input'''
−	** '''Reference dose volume:''' The output dose volume will have the same size, spacing, position, and orientation as the reference dose volume and will have the same dose unit. Voxel values of the reference dose volume do not influence the output.
−	** '''Show dose volumes only:''' If checked, only the volumes that have been created by a SlicerRT module (such as DicomRtImport or DoseAccumulation) are displayed
−	** '''Dose volume table'''
−	*** The checked dose volumes are accumulated
−	*** Weight can be assigned to ~~the dose distributions for the accumulation~~
−	* '''Output'''
−	** '''Accumulated dose volume:''' The output volume
−	** '''Apply:''' Compute accumulated dose and save it in the output volume
−	~~<!--~~
−	~~{{documentation/{{documentation/version}}/module-parametersdescription}}~~
−	~~-->~~
−
−	~~\| [[File~~:~~SlicerRT_DoseAccumulationModuleUi.png\|thumb\|445px\|Dose accumulation module UI]]~~
−	\|}
−
−	~~<!-- ---------------------------- -->~~
−	~~{{documentation/{{documentation/version}}/module-section\|Similar Modules}}~~
−	~~N/A~~
−
−	~~<!-- ---------------------------- -->~~
−	~~{{documentation/{{documentation/version}}/module-section\|References}}~~
−	~~N/A~~
−
−	~~<!-- ---------------------------- -->~~
−	~~{{documentation/{{documentation~~/~~version}}~~/~~module-section\|Information for Developers}}~~
−	~~Custom attributes:~~
−	* DicomRtImport.DoseVolume: identifier attribute that is set to each imported dose volume. Facilitates easier distinction between dose and non-dose volumes (without tampering in the Patient Hierarchy tree, see below)
−	* DicomRtImport.DoseUnitName: set in the study of each imported dose volume, the value of this attribute is read from the Dose Units (3004,0002) attribute of the RTDOSE DICOM volume
−	* DicomRtImport.DoseUnitValue: set in the study of each imported dose volume, the value of this attribute is read from the Dose Grid Scaling (3004,000E) attribute of the RTDOSE DICOM volume. This value defines a scaling factor to convert the integer voxel values of the dose volume in the DICOM file to real dose values. ~~This conversion is performed during DICOM importing, but this value is stored to let other modules know what was the original scaling factor~~
−
−	~~<!-- ---------------------------- -->~~
−	~~{{documentation/{{documentation~~/~~version}}~~/~~module-footer}}~~
−	~~<!-- ---------------------------- -->~~

@@ Line 11: / Line 11: @@
 Author: Kevin Wang (Princess Margaret Cancer Centre)<br>
 Contact: Kevin Wang, <email>kevin.wang@rmp.uhn.on.ca</email><br>
-[http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SlicerRT Back to SlicerRT home]
+[[Documentation/Nightly/Extensions/SlicerRT|Back to SlicerRT home]]
 {{documentation/{{documentation/version}}/module-introduction-row}}
 {{documentation/{{documentation/version}}/module-introduction-logo-gallery

@@ Line 37: / Line 37: @@
 <!-- ---------------------------- -->
 {{documentation/{{documentation/version}}/module-section|Panels and their use}}
-* Input
+* '''Input'''
-** Reference dose volume: The output dose volume will have the same size, spacing, position, and orientation as the reference dose volume and will have the same dose unit. Voxel values of the reference dose volume do not influence the output.
+** '''Reference dose volume:''' The output dose volume will have the same size, spacing, position, and orientation as the reference dose volume and will have the same dose unit. Voxel values of the reference dose volume do not influence the output.
-** Show dose volumes only: If checked, only the volumes that have been created by a SlicerRT module (such as DicomRtImport or DoseAccumulation) are displayed
+** '''Show dose volumes only:''' If checked, only the volumes that have been created by a SlicerRT module (such as DicomRtImport or DoseAccumulation) are displayed
-** Dose volume table
+** '''Dose volume table'''
 *** The checked dose volumes are accumulated
 *** Weight can be assigned to the dose distributions for the accumulation
-* Output
+* '''Output'''
-** Accumulated dose volume: The output volume
+** '''Accumulated dose volume:''' The output volume
-** Apply: Compute accumulated dose and save it in the output volume
+** '''Apply:''' Compute accumulated dose and save it in the output volume
 <!--
 {{documentation/{{documentation/version}}/module-parametersdescription}}

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 {{documentation/{{documentation/version}}/module-introduction-end}}
-{| class="wikitable"
+{|
+|

@@ Line 9: / Line 9: @@
 {{documentation/{{documentation/version}}/module-introduction-row}}
 This work is part of the SparKit project, funded by An Applied Cancer Research Unit of Cancer Care Ontario with funds provided by the Ministry of Health and Long-Term Care and the Ontario Consortium for Adaptive Interventions in Radiation Oncology (OCAIRO) to provide free, open-source toolset for radiotherapy and related image-guided interventions.<br>
-Author: Kevin Wang (Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto)<br>
+Author: Kevin Wang (Princess Margaret Cancer Centre)<br>
 Contact: Kevin Wang, <email>kevin.wang@rmp.uhn.on.ca</email><br>
 [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SlicerRT Back to SlicerRT home]

@@ Line 11: / Line 11: @@
 Author: Kevin Wang (Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto)<br>
 Contact: Kevin Wang, <email>kevin.wang@rmp.uhn.on.ca</email><br>
 {{documentation/{{documentation/version}}/module-introduction-row}}
 {{documentation/{{documentation/version}}/module-introduction-logo-gallery
@@ Line 18: / Line 19: @@
 }}
 {{documentation/{{documentation/version}}/module-introduction-end}}
 <!-- ---------------------------- -->
@@ Line 26: / Line 30: @@
 {{documentation/{{documentation/version}}/module-section|Use Cases}}
 Evaluate total delivered dose for multiple treatment fractions.
 <!-- ---------------------------- -->
@@ Line 49: / Line 49: @@
 {{documentation/{{documentation/version}}/module-parametersdescription}}
 -->
 <!-- ---------------------------- -->
@@ Line 61: / Line 64: @@
 {{documentation/{{documentation/version}}/module-section|Information for Developers}}
 Custom attributes:
-* DicomRtImport.DoseUnitName: required to detect a volume as a "dose volume"
+* DicomRtImport.DoseVolume: identifier attribute that is set to each imported dose volume. Facilitates easier distinction between dose and non-dose volumes (without tampering in the Patient Hierarchy tree, see below)
-* DicomRtImport.DoseUnitValue: required to detect a volume as a "dose volume"
+* DicomRtImport.DoseUnitName: set in the study of each imported dose volume, the value of this attribute is read from the Dose Units (3004,0002) attribute of the RTDOSE DICOM volume
-{{documentation/{{documentation/version}}/module-developerinfo}}
+* DicomRtImport.DoseUnitValue: set in the study of each imported dose volume, the value of this attribute is read from the Dose Grid Scaling (3004,000E) attribute of the RTDOSE DICOM volume. This value defines a scaling factor to convert the integer voxel values of the dose volume in the DICOM file to real dose values. This conversion is performed during DICOM importing, but this value is stored to let other modules know what was the original scaling factor
 <!-- ---------------------------- -->
 {{documentation/{{documentation/version}}/module-footer}}
 <!-- ---------------------------- -->

@@ Line 15: / Line 15: @@
 |{{collaborator|logo|cco}}|{{collaborator|longname|cco}}
 |{{collaborator|logo|sparkit}}|{{collaborator|longname|sparkit}}
 }}
 {{documentation/{{documentation/version}}/module-introduction-end}}

← Older revision		Revision as of 07:54, 14 June 2013
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	{{documentation/{{documentation/version}}/module-header}}		{{documentation/{{documentation/version}}/module-header}}

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 {|align="center"
-|[[File:SlicerRT0.3 DoseAccumulation.jpg|thumb|720px| Dose accumulation]]
+|[[File:SlicerRT_DoseAccumulationModuleUi.png|thumb|445px|Dose accumulation module UI]]
 |}