Documentation/Nightly/Modules/DSC MRI Analysis - Revision history

Stevedaxiao at 22:22, 7 January 2016

2016-01-07T22:22:08Z

2015-09-02T04:27:38Z

2015-08-20T22:34:59Z

2015-08-20T22:29:56Z

@@ Line 95: / Line 95: @@
 {{documentation/{{documentation/version}}/module-section|Information for Developers}}
 {{documentation/{{documentation/version}}/module-developerinfo}}
-* [https://github.com/stevedaxiao/DSC_Analysis.git Source code for analysis of DSC MRI]
+* [https://github.com/QIICR/DSC_Analysis Source code for analysis of DSC MRI]
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@@ Line 65: / Line 65: @@
 ** '''ROI Mask Image''': Mask designating the location for DSC analysis.
 ** '''AIF Mask Image''': Mask designating the location of the arterial input function (AIF). AIF can either be calculated from the input using the aifMask, prescribed directly in concentration units using the prescribedAIF option, or via a population AIF.
 ** '''Prescribed AIF''': Prescribed arterial input function (AIF).
 ** '''Output RCBV image''': Relative Cerebral Blood Volume (rCBV) map.
 ** '''Output RCBF image''': Relative Cerebral Blood Flow (rCBF) map.

@@ Line 63: / Line 63: @@
 * '''IO'''
 ** '''Input 4D image''': 4D DSC MRI Image.
-** '''ROI Mask Image''':
+** '''ROI Mask Image''': Mask designating the location for DSC analysis.
-** '''AIF Mask Image''':
+** '''AIF Mask Image''': Mask designating the location of the arterial input function (AIF). AIF can either be calculated from the input using the aifMask, prescribed directly in concentration units using the prescribedAIF option, or via a population AIF.
-** '''Prescribed AIF''':
+** '''Prescribed AIF''': Prescribed arterial input function (AIF).
-** '''Output RCBV image''':
+** '''Output RCBV image''': Relative Cerebral Blood Volume (rCBV) map.
-** '''Output RCBF image''':
+** '''Output RCBF image''': Relative Cerebral Blood Flow (rCBF) map.
-** '''Output MTT image''':
+** '''Output MTT image''': Mean Transit Time (MTT) map.
-*Advanced options
+*'''Advanced options'''
 ** '''BAT Calculation Mode''': PeakGradient(Default) or UseConstantBAT.
-** '''Constant BAT''': Constant BAT value.
+** '''Constant BAT''': Constant bolus arrival time value.
 ** '''Output Bolus Arrival Time Image''':  The bolus arrival time calculated at each pixel.
 ** '''Output Concentration 4D Image''': Delta R2* concentration image.

@@ Line 58: / Line 58: @@
 |[[Image:DSC GUI V0.png|thumb|400px|DSC MRI Analysis GUI]]
+|
-*'''Input'''
+* '''PkModeling Parameters''':
-** '''Input image''':
+** '''CBF/CBV Time Interval Value''': Time interval for CBF/CBV calculation.
 |}
@@ Line 74: / Line 89: @@
 * [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2657863/ Equations for conversion of signal to concentration for DSC]
 * [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4208985/pdf/nihms596683.pdf Other method to investigate DSC MRI]
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