Documentation/Nightly/Modules/BrainStructuresSegmenter - Revision history

Acsenrafilho at 19:24, 30 September 2017

2017-09-30T19:24:50Z

Acsenrafilho at 16:00, 9 December 2016

2016-12-09T16:00:34Z

Acsenrafilho at 16:05, 27 November 2016

2016-11-27T16:05:15Z

Acsenrafilho at 16:03, 27 November 2016

2016-11-27T16:03:35Z

Acsenrafilho at 15:59, 27 November 2016

2016-11-27T15:59:53Z

Acsenrafilho at 15:56, 27 November 2016

2016-11-27T15:56:20Z

Acsenrafilho at 15:22, 27 November 2016

2016-11-27T15:22:54Z

Acsenrafilho at 13:40, 27 November 2016

2016-11-27T13:40:37Z

Acsenrafilho at 18:22, 26 November 2016

2016-11-26T18:22:07Z

Acsenrafilho at 18:20, 26 November 2016

2016-11-26T18:20:16Z

@@ Line 24: / Line 24: @@
 [[Image:BrainStructuresSegmenter-icon.png|right]]
-This module offer a general brain segmentation pipeline, calling different algorithms depending the tissue type that the user wants to segment. The list below illustrate the segmentation methods available at moment:
+This module offers a general brain segmentation pipeline, calling different algorithms depending on the tissue type that the user wants to segment. The list below illustrates the segmentation methods available at moment:
-* [[Documentation/{{documentation/version}}/Modules/BasicBrainTissues|Basic Brain Tissues]]: A general brain tissues segmentation focused on the white matter, gray matter and CSF brain tissues segmentation.
+* [[Documentation/{{documentation/version}}/Modules/BasicBrainTissues|Basic Brain Tissues]]: A general brain tissues segmentation focused on the white matter, gray matter and CSF brain tissue segmentation.
-'''NOTE''': Each segmentation method listed are related with the segmentation part of the image processing pipeline controlled by this module, i.e. the Brain Structure Segmenter module apply a set of image processing algorithms in which, in the segmentation part, uses the above methods.
+'''NOTE''': Each segmentation method listed are related to the segmentation part of the image processing pipeline controlled by this module, i.e. the Brain Structure Segmenter module apply a set of image processing algorithms in which, in the Segmentation part, uses the above methods. The user still has the flexibility to choose what pre and post processing that should be applied in the general image processing pipeline.
-The diagram below illustrate the image processing pipeline used in this module
+The diagram below illustrates the image processing pipeline used in this module
 [[File:SegmentationDiagram_BrainsStructuresSegmenter.png|800px|thumb|center|Segmentation pipeline applied internally in this module]]

@@ Line 41: / Line 41: @@
 **A simple brain tissue mask could be obtained from this module (WM, GM and CSF are available at moment).
-<gallery widths="200px">
+<gallery widths="300px" heights="300px">
 Image:T1_tissues.png|White matter, gray matter and CSF tissues segmented from the previous MRI image
 Image:WM_3DReconstruction.png|A white matter mask 3D reconstruction

@@ Line 22: / Line 22: @@
 <!-- ---------------------------- -->
 {{documentation/{{documentation/version}}/module-section|Module Description}}
-[[Image:BrainStructuresSegmenter-icon.png|left]]
+[[Image:BrainStructuresSegmenter-icon.png|right]]
 This module offer a general brain segmentation pipeline, calling different algorithms depending the tissue type that the user wants to segment. The list below illustrate the segmentation methods available at moment:

@@ Line 22: / Line 22: @@
 <!-- ---------------------------- -->
 {{documentation/{{documentation/version}}/module-section|Module Description}}
 This module offer a general brain segmentation pipeline, calling different algorithms depending the tissue type that the user wants to segment. The list below illustrate the segmentation methods available at moment:

@@ Line 39: / Line 39: @@
 **A simple brain tissue mask could be obtained from this module (WM, GM and CSF are available at moment).
-<gallery>
+<gallery widths="200px">
 Image:T1_tissues.png|White matter, gray matter and CSF tissues segmented from the previous MRI image
 Image:WM_3DReconstruction.png|A white matter mask 3D reconstruction

@@ Line 39: / Line 39: @@
 {{documentation/{{documentation/version}}/module-section|Panels and their use}}
-[[Image:BrainStructuresSegmenter_gui.png|thumb|380px|User Interface]]
+[[Image:BrainStructuresSegmenter_gui.png|thumb|480px|User Interface]]
 IO:
 *Input Volume