Documentation/Nightly/Extensions/SlicerRT - Revision history

Grundlett: Text replacement - "\[http:\/\/www\.slicer\.org\/slicerWiki\/index\.php\/([^ ]+) ([^]]+)]" to "$2"

2019-11-27T02:26:22Z

Text replacement - "\[http:\/\/www\.slicer\.org\/slicerWiki\/index\.php\/([^ ]+) ([^]]+)]" to "$2"

2019-08-09T19:10:54Z

Comprehensive tutorials

2019-07-26T12:35:08Z

2019-07-25T16:10:31Z

Add SRO and info for I/O

2019-07-24T12:32:25Z

Add tutorials

2019-06-06T14:16:34Z

2019-06-06T14:13:32Z

2018-09-13T17:39:51Z

2018-06-27T06:51:52Z

Replaced most Assembla links

2018-04-26T16:09:38Z

Added CANARIE

@@ Line 70: / Line 70: @@
 **[[Documentation/{{documentation/version}}/Modules/Data|Subject hierarchy]]
 **[[Documentation/{{documentation/version}}/Modules/Transforms|Transform visualizer]]
-**DICOM-RT export, as [http://www.slicer.org/slicerWiki/index.php/Documentation/Labs/DICOMExport improved DICOM export function]
+**DICOM-RT export, as [[Documentation/Labs/DICOMExport|improved DICOM export function]]
 **[[Documentation/{{documentation/version}}/Modules/Segmentations|Segmentations]]
 **[[Documentation/{{documentation/version}}/Modules/SegmentEditor|Segment Editor]]

@@ Line 102: / Line 102: @@
 === Comprehensive tutorials ===
-* '''World Congress 2015 tutorial''' ''(recommended)''
+* '''Image-guided radiation therapy tutorial 2019''' ''(recommended)''
 ** Tutorial presentation: [https://www.dropbox.com/s/b7qx3n10s52o5f8/SlicerRT_WorldCongress_TutorialIGRT.pptx?dl=0 pptx] [https://github.com/SlicerRt/SlicerRtDoc/raw/master/tutorials/SlicerRT_WorldCongress_TutorialIGRT.pdf pdf]
 ** Dataset: [http://slicer.kitware.com/midas3/download/item/205391/WC2015_Gel_Slicelet_Dataset.zip download] from MIDAS

@@ Line 56: / Line 56: @@
 **[[Documentation/{{documentation/version}}/Modules/SegmentMorphology|Segment morphology]] (Add/remove margin, Unify, Intersect, etc.)
 * I/O
-**[[Documentation/{{documentation/version}}/Modules/DicomRtImport|DICOM-RT import]], [http://www.slicer.org/slicerWiki/index.php/Documentation/Labs/DICOMExport export] (handles datasets of types RT Structure Set, RT Dose, RT Plan, RT Image)
+**[[Documentation/{{documentation/version}}/Modules/DicomRtImport|DICOM-RT import]], [https://www.slicer.org/wiki/Documentation/Nightly/Modules/DICOM#DICOM_export export] (handles datasets of types RT Structure Set, RT Dose, RT Plan, RT Image)
 **[[Documentation/{{documentation/version}}/Modules/DicomSroImport|DICOM-SRO import/export]] (handles DICOM Spatial Registration object, both rigid and deformable)
 *[https://github.com/SlicerRt/SlicerRT/tree/master/BatchProcessing Batch processing scripts] (currently only one is available for command-line conversion of RTSS to volume nodes)

@@ Line 56: / Line 56: @@
 **[[Documentation/{{documentation/version}}/Modules/SegmentMorphology|Segment morphology]] (Add/remove margin, Unify, Intersect, etc.)
 * I/O
-**[[Documentation/{{documentation/version}}/Modules/DicomRtImport|DICOM-RT import]], [http://www.slicer.org/slicerWiki/index.php/Documentation/Labs/DICOMExport export]
+**[[Documentation/{{documentation/version}}/Modules/DicomRtImport|DICOM-RT import]], [http://www.slicer.org/slicerWiki/index.php/Documentation/Labs/DICOMExport export] (handles datasets of types RT Structure Set, RT Dose, RT Plan, RT Image)
 *[https://github.com/SlicerRt/SlicerRT/tree/master/BatchProcessing Batch processing scripts] (currently only one is available for command-line conversion of RTSS to volume nodes)

@@ Line 98: / Line 98: @@
 <!-- ---------------------------- -->
 {{documentation/{{documentation/version}}/extension-section|Tutorials}}
 * '''World Congress 2015 tutorial''' ''(recommended)''
 ** Tutorial presentation: [https://www.dropbox.com/s/b7qx3n10s52o5f8/SlicerRT_WorldCongress_TutorialIGRT.pptx?dl=0 pptx] [https://github.com/SlicerRt/SlicerRtDoc/raw/master/tutorials/SlicerRT_WorldCongress_TutorialIGRT.pdf pdf]
@@ Line 108: / Line 111: @@
 * '''RSNA 2012 tutorial'''
 ** Tutorial description: [http://www.donotlink.com/bEo SlicerRT wiki: Slicer tutorials at RSNA 2012]
 ** Sample data: [http://slicer.kitware.com/midas3/folder/859 download] SlicerRT ART dose verification data from Midas server
-* Summer NA-MIC week 2012 tutorial '''(deprecated)'''
-** Tutorial presentation: [https://www.assembla.com/spaces/slicerrt/documents/aAuMq81Eqr4ztvacwqjQXA/download/aAuMq81Eqr4ztvacwqjQXA download] from the SlicerRT website
+=== Module tutorials ===
-<!-- Original link: https://www.assembla.com/spaces/slicerrt/documents/bMuwgYTKur4yP-acwqjQWU/download/bMuwgYTKur4yP-acwqjQWU -->
 <!-- ---------------------------- -->

@@ Line 33: / Line 33: @@
 [[Image:SlicerRT_Logo_3.0_128x128.png]]
+|
-* SlicerRT is one of the themes of the SparKit (Software Platform and Adaptive Radiotherapy Kit) project with the goal of making 3D Slicer a powerful radiotherapy research platform.<br>SparKit is a project funded by Cancer Care Ontario and the Ontario Consortium for Adaptive Interventions in Radiation Oncology (OCAIRO) to provide free, open-source toolset for radiotherapy and related image-guided interventions.
+* SlicerRT is a radiation therapy toolkit for 3D Slicer, containing generic RT features for import/export, analysis, visualization, aiming to make 3D Slicer a powerful radiotherapy research platform. SlicerRT development is currently funded by CANARIE.<br>SlicerRT was originally created via funding by Cancer Care Ontario and the Ontario Consortium for Adaptive Interventions in Radiation Oncology (OCAIRO) to provide free, open-source toolset for radiotherapy and related image-guided interventions.
 * The SlicerRT extension incorporates [[Documentation/{{documentation/version}}/Extensions/Plastimatch|Plastimatch]] modules and algorithms.

@@ Line 139: / Line 139: @@
 <!-- ---------------------------- -->
 {{documentation/{{documentation/version}}/extension-section|Information for Developers}}
-* [https://www.assembla.com/spaces/slicerrt/wiki/SlicerRt_developers_page SlicerRT developers wiki page]
+* [https://github.com/SlicerRt/SlicerRT/wiki/SlicerRt-developers-page SlicerRT developers wiki page]
 <!-- ---------------------------- -->
 {{documentation/{{documentation/version}}/extension-footer}}
 <!-- ---------------------------- -->

@@ Line 11: / Line 11: @@
 {{documentation/{{documentation/version}}/module-section|Introduction and Acknowledgements}}
 Authors: <b>Csaba Pinter</b> (PerkLab, Queen's University), <b>Andras Lasso</b> (PerkLab, Queen's University)<br>
-Contributors: Greg Sharp (Massachusetts General Hospital), <b>Kevin Wang</b> (Princess Margaret Hospital, UHN Toronto), Steve Pieper (Isomics)<br>
+Contributors: <b>Greg Sharp</b> (Massachusetts General Hospital), Kevin Wang (Princess Margaret Hospital, UHN Toronto), Steve Pieper (Isomics)<br>
 Contacts:
-* Csaba Pinter, <email>csaba.pinter@queensu.ca</email>
+* Csaba Pinter, <email>pinter.csaba@gmail.com</email>
 * Andras Lasso, <email>lasso@cs.queensu.ca</email>
 * [https://discourse.slicer.org Slicer Forum]

@@ Line 4: / Line 4: @@
 <!-- ---------------------------- -->
 [[{{collaborator|logo|cco}}]] &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
-[[{{collaborator|logo|sparkit}}]]&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
+[[{{collaborator|logo|canarie}}]]&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
-[[{{collaborator|logo|ocairo}}]]
+[[{{collaborator|logo|ocairo}}]]&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
 <!-- ---------------------------- -->