Documentation/Nightly/Extensions/PBNRR - Revision history

Aangelos at 14:15, 7 August 2018

2018-08-07T14:15:03Z

Fdrakopo at 17:46, 24 June 2014

2014-06-24T17:46:34Z

Fdrakopo at 17:45, 24 June 2014

2014-06-24T17:45:56Z

Fdrakopo at 12:41, 23 June 2014

2014-06-23T12:41:04Z

Fdrakopo at 17:59, 20 June 2014

2014-06-20T17:59:59Z

Fdrakopo at 16:23, 20 June 2014

2014-06-20T16:23:35Z

Fdrakopo at 16:22, 20 June 2014

2014-06-20T16:22:56Z

Fdrakopo at 16:20, 20 June 2014

2014-06-20T16:20:48Z

Fdrakopo at 16:17, 20 June 2014

2014-06-20T16:17:28Z

Fdrakopo at 16:14, 20 June 2014

2014-06-20T16:14:54Z

@@ Line 10: / Line 10: @@
 Extension: [[Documentation/{{documentation/version}}/Extensions/PBNRR|Physics-Based Non-Rigid Registration (PBNRR)]]<br>
 Acknowledgments:
-This work is funded mainly by the ARRA funds for the ITK-v4 implementation with grant number:NLMA2D2201000586P. In addition, this work is supported in part by NSFgrants:CCF-1139864, CCF-1136538, and CSI-1136536 and by the John Simon Guggenheim Foundation and the Richard T.Cheng Endowment.<br>
+This work is funded mainly by the ARRA funds for the ITK-v4 implementation with grant number:NLMA2D2201000586P. In addition, this work is supported in part by the NSF grant CCF-1439079 and by the John Simon Guggenheim Foundation and the Richard T. Cheng Endowment.<br>
 Author: Fotis Drakopoulos<br>
-Contributors: Fotis Drakopoulos (CRTC), Yixun Liu (CRTC), Andriy Kot (CRTC), Andrey Fedorov (SPL B&W Harvard), Olivier Clatz (Asclepios INRIA), Nikos Chrisochoides (CRTC)<br>
+Contributors: Angelos Angelopoulos (CRTC), Fotis Drakopoulos (CRTC), Yixun Liu (CRTC), Andriy Kot (CRTC), Andrey Fedorov (SPL B&W Harvard), Olivier Clatz (Asclepios INRIA), Nikos Chrisochoides (CRTC)<br>
-Contact: Nikos Chrisochoides, <email>npchris@gmail.com</email><br>
+Contact: Nikos Chrisochoides (<email>npchris@gmail.com</email>), Angelos Angelopoulos, (<email>aangelos28@gmail.com</email>)<br>
 Website: https://crtc.cs.odu.edu/<br>
-License: BSD<br>
+License: BSD
 {{documentation/{{documentation/version}}/module-introduction-row}}
 {{documentation/{{documentation/version}}/module-introduction-logo-gallery
-|Image:CRTC_logo.jpg|Center for Real-time Computing
+|Image:Crtc_logo.png|Center for Real-time Computing
 }}
 {{documentation/{{documentation/version}}/module-introduction-end}}
@@ Line 58: / Line 60: @@
 * '''Input/Output:'''
-** '''Input Moving Image:''' The input moving image.
+** '''Input Moving Image:''' The input moving image (preoperative).
-** '''Input Fixed Image:''' The input moving image.
+** '''Input Fixed Image:''' The input fixed image (intraoperative).
-** '''Input Mask Image:''' The input moving image.
+** '''Input Mask Image:''' The input moving mask.
-** '''Input Mesh:''' The input moving image.
+** '''Input Mesh:''' The input mesh.
 ** '''Output Volume:''' Moving image to the fixed image coordinate frame (optional).
 ** '''Output Direct Deformation Field:''' Transform calculated that aligns the fixed and moving image. Maps positions in the moving coordinate frame to the fixed coordinate frame (optional).

@@ Line 20: / Line 20: @@
 |Image:CRTC_logo.jpg|Center for Real-time Computing
 }}
 {{documentation/{{documentation/version}}/module-introduction-end}}

@@ Line 20: / Line 20: @@
 |Image:CRTC_logo.jpg|Center for Real-time Computing
 }}
 {{documentation/{{documentation/version}}/module-introduction-end}}

@@ Line 14: / Line 14: @@
 Contributors: Fotis Drakopoulos (CRTC), Yixun Liu (CRTC), Andriy Kot (CRTC), Andrey Fedorov (SPL B&W Harvard), Olivier Clatz (Asclepios INRIA), Nikos Chrisochoides (CRTC)<br>
 Contact: Nikos Chrisochoides, <email>npchris@gmail.com</email><br>
-Website: https://crtc.cs.odu.edu/joomla/<br>
+Website: https://crtc.cs.odu.edu/<br>
 License: BSD<br>
 {{documentation/{{documentation/version}}/module-introduction-row}}

@@ Line 58: / Line 58: @@
 * '''Input/Output:'''
-** '''Moving Image:''' The input moving image.
+** '''Input Moving Image:''' The input moving image.
-** '''Fixed Image:''' The input moving image.
+** '''Input Fixed Image:''' The input moving image.
-** '''Mask Image:''' The input moving image.
+** '''Input Mask Image:''' The input moving image.
-** '''Mesh:''' The input moving image.
+** '''Input Mesh:''' The input moving image.
 ** '''Output Volume:''' Moving image to the fixed image coordinate frame (optional).
 ** '''Output Direct Deformation Field:''' Transform calculated that aligns the fixed and moving image. Maps positions in the moving coordinate frame to the fixed coordinate frame (optional).

@@ Line 71: / Line 71: @@
 <!-- ---------------------------- -->
 {{documentation/{{documentation/version}}/module-section|Similar Modules}}
-*[[Documentation/Nightly/Modules/BSplineDeformableRegistration]]
+N/A
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@@ Line 76: / Line 76: @@
 <!-- ---------------------------- -->
 {{documentation/{{documentation/version}}/module-section|References}}
-* Xiaodong Tao, Ming-ching Chang, “A Skull Stripping Method Using Deformable Surface and Tissue Classification”, SPIE Medical Imaging, San Diego, CA, 2010.
+* Olivier Clatz, Hervé Delingette, Ion-Florin Talos, Alexandra J. Golby, Ron Kikinis, Ferenc Jolesz, Nicholas Ayache, and Simon Warfield,“Robust Non-Rigid Registration to Capture Brain Shift from Intra-Operative MRI“, IEEE Transactions on Medical Imaging, 24(11):1417-1427, Nov. 2005.
-* Ming-ching Chang, Xiaodong Tao “Subvoxel Segmentation and Representation of Brain Cortex Using Fuzzy Clustering and Gradient Vector Diffusion”, SPIE Medical Imaging, San Diego, CA, 2010.
+* Liu Y, Kot A, Drakopoulos F, Yao C, Fedorov A, Enquobahrie A, Clatz O and Chrisochoides NP (2014), ”An ITK implementation of a physics-based non-rigid registration method for brain deformation in image-guided neurosurgery”, Frontiers in Neuroinformatics 8:33. doi: 10.3389/fninf.2014.00033
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@@ Line 86: / Line 85: @@
 <!-- ---------------------------- -->
 {{documentation/{{documentation/version}}/module-footer}}
-[[Category:Documentation/{{documentation/version}}/Modules/Segmentation]]
+[[Category:Documentation/{{documentation/version}}/Modules/Registration]]
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