Documentation/Nightly/Extensions/Igyne - Revision history

UpdateBot: Prepend documentation/versioncheck template. See http://na-mic.org/Mantis/view.php?id=2887

2013-06-14T07:50:52Z

Prepend documentation/versioncheck template. See http://na-mic.org/Mantis/view.php?id=2887

Tkapur: Replaced content with ' Moved to http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/iGyne'

2012-09-06T14:53:25Z

Replaced content with ' Moved to http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/iGyne'

Tkapur at 14:41, 6 September 2012

2012-09-06T14:41:02Z

Tkapur at 14:39, 6 September 2012

2012-09-06T14:39:14Z

Xiaojun at 14:20, 6 September 2012

2012-09-06T14:20:37Z

Xiaojun at 16:14, 4 September 2012

2012-09-04T16:14:00Z

JChris.FillionR at 15:29, 3 September 2012

2012-09-03T15:29:35Z

JChris.FillionR: moved Documentation/4.1/Extensions/Igyne to Documentation/Nightly/Extensions/Igyne

2012-09-03T15:17:57Z

moved Documentation/4.1/Extensions/Igyne to Documentation/Nightly/Extensions/Igyne

Xiaojun at 21:15, 31 August 2012

2012-08-31T21:15:09Z

Xiaojun at 20:58, 31 August 2012

2012-08-31T20:58:41Z

← Older revision		Revision as of 07:50, 14 June 2013
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		+	<noinclude>{{documentation/versioncheck}}</noinclude>

	Moved to http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/iGyne		Moved to http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/iGyne

← Older revision		Revision as of 14:53, 6 September 2012
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−	~~<!-- ---------------------------- -->~~
−	~~{{documentation/{{documentation/version}}/module-header}}~~
−	~~<!-- ---------------------------- -->~~

−	~~<!-- ---------------------------- -->~~	+	Moved to http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/iGyne
−	~~{{documentation/{{documentation/version}}/module-section\|Introduction and Acknowledgements}}~~
−	~~Author: Xiaojun Chen<br>~~
−	~~Contributors: Xiaojun Chen(SPL),Jan Egger(SPL),Tina Kapur(SPL,PI of this project),Akila N. Viswanathan(BWH), Steve Pieper(Isomics)<br>~~
−	~~Contact: Xiaojun Chen, <email>xiaojun@bwh.harvard.edu</email>,Tina Kapur, <email>tkapur@bwh.harvard.edu</email><br>~~
−	~~Website: https://github.com/xjchen/igyne<br>~~
−	~~License: [~~http://www.slicer.org/~~pages~~/~~LicenseText Slicer license]~~
−
−
−
−	~~<!-- ---------------------------- -->~~
−	~~{{documentation/{{documentation/version}}/extension-section\|Extension Description}}~~
−	~~iGyne is an open source software for MR-Guided Interstitial Gynecologic Brachytherapy~~. It enables on-time processing of the intra-operative MRI data via a DICOM connection to the scanner followed by a multi-stage registration of CAD models of the template and the obturator to the patient images. This allows the virtual placement of interstitial needles during the intervention. Software features include:
−
−	*Loading of Applicator CAD models and MR images
−	*Initial registration of CAD model of the Template to MR images
−	*Registration Refinement
−	*Visualization of Registration
−	*Needle Selection and Display of Virtual Needles relative to Applicator CAD models and Tumor Segmentation
−
−	~~<!-- ---------------------------- -->~~
−	~~{{documentation/{{documentation/version}}/extension-section\|Modules}}~~
−
−	~~<!-- ---------------------------- -->~~
−	~~{{documentation/{{documentation/version}}/extension-section\|Use Cases}}~~
−	~~[https://github.com/xjchen/igyne/tree/master/Sample%20data Sample data] and~~
−	~~[https:/~~/~~github.com~~/~~xjchen~~/~~igyne/tree/master/scene%20for%20template%20and%20obturator CAD models] to use with modules.~~
−	~~<gallery widths="200px" perrow="4">~~
−	~~Image:IGyne 1.0-registration.png\|Screenshot of Registration~~
−	~~Image:IGyne 1.0 needle visualization.png\|Screenshot of Needle Visualization~~
−	~~Image:Igyne 1.0-Tumor and Needle Visualization.png\|Screenshot of Tumor and Needle Visualization~~
−	~~</gallery>~~
−
−	~~<!-- ---------------------------- -->~~
−	~~{{documentation/{{documentation/version}}/extension-section\|Tutorials}}~~
−	[[media:Igyne_Tutorial.ppt \| Igyne Tutorial]] (a .PPT file with 18 pages) will guide you step-by-step through the process of loading of applicator CAD models, performing registration, selecting virtual needle and viewing the results within Slicer4. It will take about 10 minutes to finish this tutorial.
−	~~<!--<gallery widths="200px" perrow="4">~~
−	~~</gallery>-->~~
−
−	~~<!-- ---------------------------- -->~~
−	~~{{documentation/{{documentation/version}}/extension-section\|Similar~~ Extensions}}
−	N/A
−
−	~~<!-- ---------------------------- -->~~
−	~~{{documentation/{{documentation/version}}/extension-section\|References}}~~
−	* http://www.na-mic.org/Wiki/index.php/2012_Summer_Project_Week:iGyne
−	* Xiaojun Chen, Jan Egger, Akila Viswanathan, Neha Agrawal, William Wells, Ron Kikinis, Clare Tempany, Ferenc Jolesz and Tina Kapur. "Image Processing for MR-guided Gynecologic Interstitial Brachytherapy in AMIGO", The 9th Interventional MRI Symposium. September 22-23, 2012.
−
−
−	~~<!-- ---------------------------- -->~~
−	~~{{documentation/{{documentation/version}}/extension-section\|Information for Developers}}~~
−	~~{{documentation/{{documentation/version}}/extension-developerinfo}}~~
−
−	~~<!-- ---------------------------- -->~~
−	~~{{documentation/{{documentation/version}}/extension-footer}}~~
−	~~<!-- ---------------------------- -->~~

@@ Line 15: / Line 15: @@
 <!-- ---------------------------- -->
 {{documentation/{{documentation/version}}/extension-section|Extension Description}}
-iGyne is an open source software for MR-Guided Interstitial Gynecologic Brachytherapy. It enables on-time processing of the intra-operative MRI data via a DICOM connection to the scanner followed by a multi-stage registration of CAD models of the template and the obturator to the patient images. This allows the virtual placement of interstitial needles during the intervention to assist the physician positioning decision.Software features include:
+iGyne is an open source software for MR-Guided Interstitial Gynecologic Brachytherapy. It enables on-time processing of the intra-operative MRI data via a DICOM connection to the scanner followed by a multi-stage registration of CAD models of the template and the obturator to the patient images. This allows the virtual placement of interstitial needles during the intervention. Software features include:
 *Loading of Applicator CAD models and MR images

@@ Line 15: / Line 15: @@
 <!-- ---------------------------- -->
 {{documentation/{{documentation/version}}/extension-section|Extension Description}}
-Igyne is an open source software for MR-Guided Interstitial Gynecologic Brachytherapy. It enables on-time processing of the intra-operative MRI data via a DICOM connection to the scanner followed by a multi-stage registration of CAD models of the template and the obturator to the patient images. This allows the virtual placement of interstitial needles during the intervention to assist the physician positioning decision.Software features include:
+iGyne is an open source software for MR-Guided Interstitial Gynecologic Brachytherapy. It enables on-time processing of the intra-operative MRI data via a DICOM connection to the scanner followed by a multi-stage registration of CAD models of the template and the obturator to the patient images. This allows the virtual placement of interstitial needles during the intervention to assist the physician positioning decision.Software features include:
 *Loading of Applicator CAD models and MR images

@@ Line 6: / Line 6: @@
 {{documentation/{{documentation/version}}/module-section|Introduction and Acknowledgements}}
 Author: Xiaojun Chen<br>
-Contributors: Xiaojun Chen,Jan Egger,Tina Kapur,Akila N. Viswanathan(BWH), Steve Pieper(Isomics)<br>
+Contributors: Xiaojun Chen(SPL),Jan Egger(SPL),Tina Kapur(SPL,PI of this project),Akila N. Viswanathan(BWH), Steve Pieper(Isomics)<br>
-Contact: Xiaojun Chen, <email>xiaojun@bwh.harvard.edu</email><br>
+Contact: Xiaojun Chen, <email>xiaojun@bwh.harvard.edu</email>,Tina Kapur, <email>tkapur@bwh.harvard.edu</email><br>
 Website: https://github.com/xjchen/igyne<br>
 License: [http://www.slicer.org/pages/LicenseText Slicer license]

@@ Line 38: / Line 38: @@
 <!-- ---------------------------- -->
 {{documentation/{{documentation/version}}/extension-section|Tutorials}}
-[[media:Igyne_Tutorial.ppt | Igyne Tutorial]]
+[[media:Igyne_Tutorial.ppt | Igyne Tutorial]] (a .PPT file with 18 pages) will guide you step-by-step through the process of loading of applicator CAD models, performing registration, selecting virtual needle and viewing the results within Slicer4. It will take about 10 minutes to finish this tutorial.
 <!--<gallery widths="200px" perrow="4">
 </gallery>-->

← Older revision	Revision as of 15:17, 3 September 2012
(No difference)

@@ Line 28: / Line 28: @@
 <!-- ---------------------------- -->
 {{documentation/{{documentation/version}}/extension-section|Use Cases}}
-[https://github.com/xjchen/igyne/tree/master/Sample%20data CAD models] and
+[https://github.com/xjchen/igyne/tree/master/Sample%20data Sample data] and
-[https://github.com/xjchen/igyne/tree/master/scene%20for%20template%20and%20obturator Sample data] to use with modules.
+[https://github.com/xjchen/igyne/tree/master/scene%20for%20template%20and%20obturator CAD models] to use with modules.
 <gallery widths="200px" perrow="4">
 Image:IGyne 1.0-registration.png|Screenshot of Registration