Documentation/Nightly/Extensions/DTIProcess - Revision history

Fbudin at 19:05, 16 July 2014

2014-07-16T19:05:38Z

Fbudin at 18:58, 16 July 2014

2014-07-16T18:58:23Z

Fbudin at 18:56, 16 July 2014

2014-07-16T18:56:36Z

UpdateBot: Prepend documentation/versioncheck template. See http://na-mic.org/Mantis/view.php?id=2887

2013-06-14T07:58:06Z

Prepend documentation/versioncheck template. See http://na-mic.org/Mantis/view.php?id=2887

Fbudin at 14:15, 21 February 2013

2013-02-21T14:15:38Z

Fbudin at 22:12, 20 February 2013

2013-02-20T22:12:48Z

Fbudin at 20:13, 20 February 2013

2013-02-20T20:13:52Z

Fbudin at 20:31, 2 January 2013

2013-01-02T20:31:08Z

Fbudin at 16:16, 5 December 2012

2012-12-05T16:16:37Z

Fbudin: moved Documentation/Nightly/Extensions/DTIProcess ToolKit to Documentation/Nightly/Extensions/DTIProcess

2012-11-29T14:53:55Z

moved Documentation/Nightly/Extensions/DTIProcess ToolKit to Documentation/Nightly/Extensions/DTIProcess

@@ Line 11: / Line 11: @@
 License: [http://www.apache.org/licenses/LICENSE-2.0.html Apache License, Version 2.0]
 <gallery>
 Image:UNC-NIRAL.png‎|NIRAL
 Image:UNC-logo.png|UNC

@@ Line 37: / Line 37: @@
 *[[Documentation/{{documentation/version}}/Modules/fiberstats|fiberstats]]
-NOTE: Deprecated tools that used to be part of this package:
+<!-- ---------------------------- -->
+{{documentation/{{documentation/version}}/extension-section|Deprecated tools (used to be part of this package)}}
 *[[Documentation/{{documentation/version}}/Modules/fibertrack|fibertrack]]
 *[[Documentation/{{documentation/version}}/Modules/maxcurvature|maxcurvature]]

@@ Line 9: / Line 9: @@
 Contact: Francois Budin, <email>fbudin@unc.edu</email><br>
 Website: http://www.nitrc.org/projects/dtiprocess/<br>
-License: [http://www.nitrc.org/include/glossary.php#187 BSD]
+License: [http://www.apache.org/licenses/LICENSE-2.0.html Apache License, Version 2.0]
 <gallery>
 Image:UNC-NIRAL.png‎|NIRAL
@@ Line 19: / Line 19: @@
 DTIProcess is a DTI processing and analysis toolkit developed in UNC and University of Utah. Tools in this toolkit include:
-* dtiestim: tool that takes in a set of DWIs in nrrd format and estimates a tensor field out of it. It also has many useful options.
+* dtiestim (in Diffusion/Diffusion Weighted Images): tool that takes in a set of DWIs in nrrd format and estimates a tensor field out of it. It also has many useful options.
-* dtiprocess: tool that handles tensor fields
+* dtiprocess (in Diffusion/Diffusion Tensor Images): tool that handles tensor fields
-* maxcurvature: computes Hessian of an image. Typically the input image is a Fractional Anisotropy (FA) image
+* dtiaverage (in Diffusion/Diffusion Tensor Images/CommandLineOnly): program that allows to compute the average of an arbitrary number of tensor fields. This tools should be used in a command line.
-* dtiaverage (Should be used in a command line): program that allows to compute the average of an arbitrary number of tensor fields
+* fiberprocess (in Diffusion/Tractography): tool that manage fiber files extracted from the fibertrack tool or any fiber tracking algorithm
-* fibertrack: program that implements a simple streamline tractography method based on the principal eigenvector of the tensor field
+* fiberstats (in Diffusion/Tractography/CommandLineOnly): program that prints out some statistics computed on a fiber bundle. This tools should be used in a command line.
-All the above software will appear in 3D Slicer in the module list under '''Diffusion>NIRALPipeline'''
+NOTE:
 <!-- ---------------------------- -->
@@ Line 35: / Line 34: @@
 *[[Documentation/{{documentation/version}}/Modules/dtiprocess|dtiprocess]]
 *[[Documentation/{{documentation/version}}/Modules/dtiaverage|dtiaverage]]
 *[[Documentation/{{documentation/version}}/Modules/fiberprocess|fiberprocess]]
 *[[Documentation/{{documentation/version}}/Modules/fiberstats|fiberstats]]
 *[[Documentation/{{documentation/version}}/Modules/maxcurvature|maxcurvature]]
 <!-- ---------------------------- -->
 {{documentation/{{documentation/version}}/extension-section|Use Cases}}
@@ Line 47: / Line 48: @@
 Image:DTIEstim-DTI-FA-crop.png|Fractional Anisotropy
 Image:DTIProcess-MD-crop.png|Mean Diffusivity
 Image:FiberStats-Results.png |Fibers statistics
 </gallery>

← Older revision		Revision as of 07:58, 14 June 2013
Line 1:		Line 1:
		+	<noinclude>{{documentation/versioncheck}}</noinclude>
	<!-- ---------------------------- -->		<!-- ---------------------------- -->
	{{documentation/{{documentation/version}}/module-header}}		{{documentation/{{documentation/version}}/module-header}}

@@ Line 1: / Line 1: @@
 <!-- ---------------------------- -->
 {{documentation/{{documentation/version}}/module-header}}
 <!-- ---------------------------- -->

@@ Line 6: / Line 6: @@
 {{documentation/{{documentation/version}}/module-developerinfo}}
-This extension currently does not work in Slicer4 nightly build. This is due to the integration of ITKv4 in Slicer4. This should be corrected soon.
+This extension currently does not work in Slicer4 nightly build on Windows. This is due to the integration of ITKv4 in Slicer4. This should be corrected soon.
 <!-- ---------------------------- -->

@@ Line 3: / Line 3: @@
 <!-- ---------------------------- -->
 {{documentation/{{documentation/version}}/module-section|Introduction and Acknowledgements}}
-Author: Casey Goodlett<br>
+Author: Francois Budin<br>
-Contributors: Aditya Gupta (NIRAL, University Of North Carolina), Clement Vachet (SCI Institute, University of Utah), Francois Budin (NIRAL, University of North Carolina), Guido Gerig (SCI Institute, University of Utah), Hans Johnson (University of Iowa), Martin Styner (NIRAL, University Of North Carolina), Sylvain Gouttard (SCI Institute, University of Utah), Yundi Shi (NIRAL, University of North Carolina), Zhexing Liu (NIRAL, University of North Carolina), Casey Goodlett (Kitware)<br>
+Contributors:  Casey Goodlett (Kitware), Aditya Gupta (NIRAL, University Of North Carolina), Clement Vachet (SCI Institute, University of Utah), Francois Budin (NIRAL, University of North Carolina), Guido Gerig (SCI Institute, University of Utah), Hans Johnson (University of Iowa), Martin Styner (NIRAL, University Of North Carolina), Sylvain Gouttard (SCI Institute, University of Utah), Yundi Shi (NIRAL, University of North Carolina), Zhexing Liu (NIRAL, University of North Carolina)<br>
 Contact: Francois Budin, <email>fbudin@unc.edu</email><br>
 Website: http://www.nitrc.org/projects/dtiprocess/<br>

← Older revision	Revision as of 14:53, 29 November 2012
(No difference)