https://www.slicer.org/w/index.php?action=history&feed=atom&title=Documentation%2F4.6%2FSlicerApplication%2FStructureSets 2026-04-10T22:58:53Z Revision history for this page on the wiki MediaWiki 1.33.0 https://www.slicer.org/w/index.php?title=Documentation/4.6/SlicerApplication/StructureSets&diff=62682&oldid=prev 2019-11-27T14:53:45Z

<p>Text replacement - &quot;https?:\/\/www.slicer.org\/slicerWiki\/index.php\/([^ ]+) &quot; to &quot;https://www.slicer.org/wiki/$1&quot;</p> <table class="diff diff-contentalign-left" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 14:53, 27 November 2019</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l19" >Line 19:</td> <td colspan="2" class="diff-lineno">Line 19:</td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>=How to git=</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>=How to git=</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div># Basic tutorials</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div># Basic tutorials</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>## <del class="diffchange diffchange-inline">http</del>://www.slicer.org/<del class="diffchange diffchange-inline">slicerWiki/index.php</del>/Slicer3:git-svn</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>## <ins class="diffchange diffchange-inline">https</ins>://www.slicer.org/<ins class="diffchange diffchange-inline">wiki</ins>/Slicer3:git-svn## http://git.or.cz/course/svn.html</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>## http://git.or.cz/course/svn.html</div></td><td colspan="2"> </td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div># My code is located here</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div># My code is located here</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>## https://github.com/gregsharp/Slicer/tree/gcstest</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>## https://github.com/gregsharp/Slicer/tree/gcstest</div></td></tr> </table>

Grundlett https://www.slicer.org/w/index.php?title=Documentation/4.6/SlicerApplication/StructureSets&diff=48011&oldid=prev 2016-11-07T08:06:15Z

<p>Nightly -&gt; 4.6</p> <p><b>New page</b></p><div>&lt;noinclude&gt;{{documentation/versioncheck}}&lt;/noinclude&gt;<br /> __NOTOC__<br /> These are Greg's development notes. Beware of inaccurate and misleading information below.<br /> <br /> <br /> =Introduction=<br /> <br /> The term &quot;structure set&quot; is used in RT to denote a set of structures (labels) which are attached to an image. <br /> The goal of this project is to improve Slicer so it can handle overlapping structures. <br /> The following is a rough list of required functionality:<br /> <br /> # Identify structureset images at load time<br /> # Load structureset images<br /> # Display overlapping contours in structure set<br /> # Editor can switch between labelmap and structureset representation<br /> # Modify editor GUI to make easier selecting current structure<br /> # Save structureset images<br /> <br /> =How to git=<br /> # Basic tutorials<br /> ## http://www.slicer.org/slicerWiki/index.php/Slicer3:git-svn<br /> ## http://git.or.cz/course/svn.html<br /> # My code is located here<br /> ## https://github.com/gregsharp/Slicer/tree/gcstest<br /> # It is a fork of SlicerRT<br /> ## https://github.com/SlicerRt/Slicer<br /> # Or perhaps Slicer<br /> ## https://github.com/Slicer/Slicer<br /> # Update like this:<br /> ## git pull git@github.com:gregsharp/Slicer.git gcstest<br /> ## Or, because I created an alias, like this:<br /> ## git pull gcs gcstest<br /> ## The alias is made like this:<br /> ## git remote add gcs git@github.com:gregsharp/Slicer.git<br /> # My code is branched off of SlicerRT<br /> ## To rebase onto main slicer trunk, do this:<br /> ## git remote add slicer https://github.com/Slicer/Slicer.git<br /> ## git pull --rebase slicer master<br /> ## However, this doesn't work because my fork contains all of SlicerRT, which conflicts with slicer<br /> # So I make a new fork, based on slicer itself<br /> ## git clone git://github.com/Slicer/Slicer.git Slicer-gcs<br /> ## git remote add gcs-slicer git@github.com:gregsharp/gcs-slicer.git<br /> ## git push gcs-slicer master<br /> ## But this doesn't work &quot;ERROR: Repository not found.&quot;<br /> # Eventually I had to give up, and delete the repository<br /> ## The changes were to this file: Libs/MRML/Core/vtkMRMLVolumeArchetypeStorageNode.cxx<br /> <br /> =Notes=<br /> <br /> # Identifying structureset images<br /> ## For now, I just assume that any vector image is a structureset image<br /> # Loading structureset images<br /> ## Images, when loaded, are sent to vtkMRMLVolumeArchetypeStorageNode::ReadData(), which decides whether the file has a scalar or vector image<br /> ## The type of the MRML node created is vtkMRMLVectorVolumeNode<br /> ## Ref: Libs/MRML/Core/vtkMRMLVolumeArchetypeStorageNode.cxx<br /> ## A vtkMRMLVectorVolumeDisplayNode is attached to the storage node<br /> # Is an image a labelmap?<br /> ## This is apparently a function of the XML file, not the image<br /> ## vtkMRMLScalarVolumeNode::SetLabelMap()<br /> # Labelmap display<br /> ## ??<br /> ## ??<br /> # Displaying overlapping contours</div>

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