https://www.slicer.org/w/index.php?action=history&feed=atom&title=Documentation%2F4.6%2FExtensions%2FMeshToLabelMapDocumentation/4.6/Extensions/MeshToLabelMap - Revision history2026-04-17T18:26:16ZRevision history for this page on the wikiMediaWiki 1.33.0https://www.slicer.org/w/index.php?title=Documentation/4.6/Extensions/MeshToLabelMap&diff=47896&oldid=prevUpdateBot: Nightly -> 4.62016-11-07T07:46:50Z<p>Nightly -> 4.6</p>
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{{documentation/{{documentation/version}}/module-section|Introduction and Acknowledgements}}<br />
Author: Francois Budin (UNC)<br><br />
Contributors: Ipek Oguz (University of Iowa)<br><br />
Contact: Francois Budin, <email>fbudin@unc.edu</email><br><br />
Website: https://github.com/NIRALUser/MeshToLabelMap<br><br />
License: [http://www.apache.org/licenses/LICENSE-2.0.html Apache License, Version 2.0]<br />
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Image:UNC-NIRAL.png|NIRAL<br />
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Image:Logo-namic.jpg|NAMIC<br />
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{{documentation/{{documentation/version}}/extension-section|Extension Description}}<br />
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===Quick Tour of Features and Use===<br />
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This extension computes a label map from a 3D model.<br />
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A list panels in the interface, their features, what they mean, and how to use them.<br />
A list panels in the interface, their features, what they mean, and how to use them.<br />
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* <span style="color:blue">'''''I/O parameters'''''</span>: <br />
** <span style="color:green">'''Input Mesh'''</span> [<span style="color:orange">--input_mesh</span>] [<span style="color:pink">--m</span>]: Input mesh to convert into a label map<br />
** <span style="color:green">'''Output Label Map'''</span> [<span style="color:orange">--output_labelmap</span>] [<span style="color:pink">-l</span>]: Output label map<br />
* <span style="color:blue">'''''Output label map information'''''</span>: <br />
** <span style="color:green">'''Reference Image'''</span> [<span style="color:orange">--reference_volume</span>] [<span style="color:pink">-R</span>]: Reference image: used to set the output image size, orientation, spacing and dimensions<br />
** <span style="color:green">'''Pixel Value'''</span> [<span style="color:orange">--pixel_value</span>] : Label map pixel value (needs to be an integer between 1 and 255 included) ''Default value: 1''<br />
** <span style="color:green">'''Spacing'''</span> [<span style="color:orange">--spacing</span>] [<span style="color:pink">-s</span>]: Output label map volume spacing (in mm) ''Default value: -1,-1,-1''<br />
** <span style="color:green">'''Boundary Extension'''</span> [<span style="color:orange">--boundary_extension</span>] [<span style="color:pink">-e</span>]: Extension (in number of voxel) of the boundary box computed from the input mesh ''Default value: 1,1,1''<br />
* <span style="color:blue">'''''Post-processing parameters'''''</span>: <br />
** <span style="color:green">'''Apply smoothing'''</span> [<span style="color:orange">--median</span>] : Select if a median image filter smoothing is applied to the output label map ''Default value: 0''<br />
** <span style="color:green">'''Smoothing kernel radius'''</span> [<span style="color:orange">--median_radius</span>] : Radius (in number of voxel) of the kernel of the median smoothing ''Default value: -1,-1,-1''<br />
* <span style="color:blue">'''''Advanced parameters'''''</span>: <br />
** <span style="color:green">'''Verbose'''</span> [<span style="color:orange">--verbose</span>] : Print information while tool in running ''Default value: 0''<br />
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{{documentation/{{documentation/version}}/extension-section|Use Cases}}<br />
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Image:MeshToLabelMapScreenshot.png|Screenshot<br />
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{{documentation/{{documentation/version}}/extension-section|Similar Extensions}}<br />
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{{documentation/{{documentation/version}}/extension-section|Information for Developers}}<br />
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More information as well as the source code can found on the project webpage: https://github.com/NIRALUser/MeshToLabelMap<br />
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