https://www.slicer.org/w/index.php?action=history&feed=atom&title=Documentation%2F4.4%2FModules%2FT1_Mapping 2026-06-30T02:47:12Z Revision history for this page on the wiki MediaWiki 1.33.0 https://www.slicer.org/w/index.php?title=Documentation/4.4/Modules/T1_Mapping&diff=42184&oldid=prev 2015-07-15T16:27:10Z

<p></p> <table class="diff diff-contentalign-left" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 16:27, 15 July 2015</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l59" >Line 59:</td> <td colspan="2" class="diff-lineno">Line 59:</td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;!-- ---------------------------- --&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;!-- ---------------------------- --&gt;</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>{{documentation/{{documentation/version}}/module-section|References}}</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>{{documentation/{{documentation/version}}/module-section|References}}</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>* [https://<del class="diffchange diffchange-inline">dblab.duhs</del>.duke.edu/<del class="diffchange diffchange-inline">modules</del>/<del class="diffchange diffchange-inline">QIBAcontent</del>/<del class="diffchange diffchange-inline">index.php?id=1 </del> QIBA T1 phantom]</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>* [https://<ins class="diffchange diffchange-inline">sites</ins>.duke.edu/<ins class="diffchange diffchange-inline">dblab</ins>/<ins class="diffchange diffchange-inline">qibacontent</ins>/  QIBA T1 phantom]</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>* [http://europepmc.org/articles/pmc3620726 Basic equation for T1 mapping]</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>* [http://europepmc.org/articles/pmc3620726 Basic equation for T1 mapping]</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td></tr> <tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l65" >Line 65:</td> <td colspan="2" class="diff-lineno">Line 65:</td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>{{documentation/{{documentation/version}}/module-section|Information for Developers}}</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>{{documentation/{{documentation/version}}/module-section|Information for Developers}}</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>{{documentation/{{documentation/version}}/module-developerinfo}}</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>{{documentation/{{documentation/version}}/module-developerinfo}}</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>Source code: https://github.com/<del class="diffchange diffchange-inline">QIICR</del>/T1_Mapping</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Source code: https://github.com/<ins class="diffchange diffchange-inline">stevedaxiao</ins>/T1_Mapping</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;!-- ---------------------------- --&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;!-- ---------------------------- --&gt;</div></td></tr> </table>

Stevedaxiao https://www.slicer.org/w/index.php?title=Documentation/4.4/Modules/T1_Mapping&diff=41141&oldid=prev 2015-03-21T03:20:10Z

<p>Created page with &#039;&lt;noinclude&gt;{{documentation/versioncheck}}&lt;/noinclude&gt; &lt;!-- ---------------------------- --&gt; {{documentation/{{documentation/version}}/module-header}} &lt;!-- -----------------------…&#039;</p> <p><b>New page</b></p><div>&lt;noinclude&gt;{{documentation/versioncheck}}&lt;/noinclude&gt;<br /> &lt;!-- ---------------------------- --&gt;<br /> {{documentation/{{documentation/version}}/module-header}}<br /> &lt;!-- ---------------------------- --&gt;<br /> <br /> &lt;!-- ---------------------------- --&gt;<br /> {{documentation/{{documentation/version}}/module-section|Introduction and Acknowledgements}}<br /> {{documentation/{{documentation/version}}/module-introduction-start|{{documentation/modulename}}}}<br /> {{documentation/{{documentation/version}}/module-introduction-row}}<br /> Extension: [[Documentation/{{documentation/version}}/Extensions/T1_Mapping|T1_Mapping]]&lt;br&gt;<br /> Acknowledgments:<br /> This work is part of the National Alliance for Medical Image Computing (NA-MIC), funded by the National Institutes of Health through the NIH Roadmap for Medical Research, and by National Cancer Institute as part of the Quantitative Imaging Network initiative (U01CA154601) and QIICR (U24CA180918).&lt;br&gt;<br /> Implementation of the T1 Mapping was contributed by Xiao Da from MGH.&lt;br&gt;<br /> Author: Xiao Da (MGH), Artem Mamonov (MGH), Jayashree Kalpathy-Cramer (MGH) and Andriy Fedorov (BWH)&lt;br&gt;<br /> Contact: Xiao Da, &lt;email&gt;XDA@mgh.harvard.edu&lt;/email&gt;&lt;br&gt;<br /> {{documentation/{{documentation/version}}/module-introduction-row}}<br /> {{documentation/{{documentation/version}}/module-introduction-logo-gallery<br /> |{{collaborator|logo|namic}}|{{collaborator|longname|namic}}<br /> |{{collaborator|logo|qiicr}}|{{collaborator|longname|qiicr}}<br /> |{{collaborator|logo|martinos}}|{{collaborator|longname|martinos}}<br /> }}<br /> <br /> <br /> {{documentation/{{documentation/version}}/module-introduction-end}}<br /> <br /> &lt;!-- ---------------------------- --&gt;<br /> {{documentation/{{documentation/version}}/module-section|Module Description}}<br /> T1 mapping estimates effective tissue parameter maps (T1) from multi-spectral FLASH MRI scans with different flip angles.<br /> &lt;!-- ---------------------------- --&gt;<br /> <br /> &lt;!-- ---------------------------- --&gt;<br /> {{documentation/{{documentation/version}}/module-section|Use Cases}}<br /> *Take multi-spectral FLASH images with an arbitrary number of flip angles as input, and estimate the T1 values of the data for each voxel.<br /> *Read repetition time(TR), echo time(TE) and flip angles from the Dicom header directly.<br /> *Prostate, brain, head &amp; neck, cervix, breast and etc.<br /> {|<br /> |[[Image:T1_Mapping_Sample_Results.png|thumb|340px|Sample Results of T1 Mapping]]<br /> |}<br /> <br /> &lt;!-- ---------------------------- --&gt;<br /> {{documentation/{{documentation/version}}/module-section|Tutorials}}<br /> &lt;!-- ---------------------------- --&gt;<br /> {{documentation/{{documentation/version}}/module-section|Panels and their use}}<br /> {|<br /> |[[Image:T1_Mapping_GUI.png|thumb|250px|T1 Mapping]]<br /> | <br /> * '''Parameters''': <br /> ** '''Input Volume''': Multi-spectral FLASH MRI on multi-volume dicom format<br /> ** '''Output Volume''': T1 mapping result calculated at each voxel<br /> |}<br /> <br /> &lt;!-- ---------------------------- --&gt;<br /> {{documentation/{{documentation/version}}/module-section|Similar Modules}}<br /> * [[Documentation/{{documentation/version}}/Modules/MultiVolumeExplorer|MultiVolumeExplorer]]<br /> * [[Documentation/{{documentation/version}}/Modules/MultiVolumeImporter|MultiVolumeImporter]]<br /> * [[Documentation/{{documentation/version}}/Modules/PkModeling|PkModeling]]<br /> <br /> <br /> &lt;!-- ---------------------------- --&gt;<br /> {{documentation/{{documentation/version}}/module-section|References}}<br /> * [https://dblab.duhs.duke.edu/modules/QIBAcontent/index.php?id=1 QIBA T1 phantom]<br /> * [http://europepmc.org/articles/pmc3620726 Basic equation for T1 mapping]<br /> <br /> &lt;!-- ---------------------------- --&gt;<br /> {{documentation/{{documentation/version}}/module-section|Information for Developers}}<br /> {{documentation/{{documentation/version}}/module-developerinfo}}<br /> Source code: https://github.com/QIICR/T1_Mapping<br /> <br /> &lt;!-- ---------------------------- --&gt;<br /> {{documentation/{{documentation/version}}/module-footer}}<br /> [[Category:Documentation/{{documentation/version}}/Modules/Quantification]]<br /> &lt;!-- ---------------------------- --&gt;</div>

Stevedaxiao