UpdateBot: Prepend documentation/versioncheck template. See http://na-mic.org/Mantis/view.php?id=2887

2013-06-14T07:46:57Z

Prepend documentation/versioncheck template. See http://na-mic.org/Mantis/view.php?id=2887

Fbudin: /* Usage */

2012-11-27T19:16:55Z

Usage

Fbudin: Created page with 'NOTOC ===DTIAverage=== DTIAverage {| |User Interface |} == General Information == ===Module Type & Category=== Type: CLI Category: …'

2012-11-27T19:16:27Z

Created page with '__NOTOC__ ===DTIAverage=== DTIAverage {| |thumb|280px|User Interface |} == General Information == ===Module Type & Category=== Type: CLI Category: …'

New page

__NOTOC__

===DTIAverage===
DTIAverage

{|
|[[Image:DTIAverage.png|thumb|280px|User Interface]]
|}

== General Information ==

===Module Type & Category===

Type: CLI

Category: Diffusion.NIRALPipeline.OnlyCommandLine

===Authors, Collaborators & Contact===

Author: Casey Goodlett

Contributors:

Contact: name, email

===Module Description===
{| style="color:green" border="1"
|Program title || DTIAverage
|-
|Program description || dtiaverage is a program that allows to compute the average of an arbitrary number of tensor fields (listed after the --inputs option) This program is used in our pipeline as the last step of the atlas building processing. When all the tensor fields have been deformed in the same space, to create the average tensor field (--tensor_output) we use dtiaverage. \n Several average method can be used (specified by the --method option): euclidian, log-euclidian and pga. The default being euclidian.
|-
|Program version || 1.0.0
|-
|Program documentation-url || http://www.google.com/
|-
|}

== Usage ==

This program takes multiple inputs. Since 3D Slicer does not allow a user to give multiple inputs, this software is not really usable within Slicer. It is recommended to use it as a command line tool.

===Quick Tour of Features and Use===

A list panels in the interface, their features, what they mean, and how to use them.
{|
|
* '''''I/O''''':
** '''Inputs''' [----inputs] : List of all the tensor fields to be averaged

** '''Averaged tensor field file name''' [----tensor_output] : Averaged tensor volume

* '''''Advanced options''''':
** '''DTI double (do not use in 3D Slicer)''' [----DTI_double] : Tensor components are saved as doubles (cannot be visualized in Slicer) ''Default value: false''
** '''Verbose''' [----verbose] [-v]: produce verbose output ''Default value: 0''
|[[Image:DTIAverage.png|thumb|280px|User Interface]]
|}

== More Information ==

More information is available on the project webpage: http://www.nitrc.org/projects/dtiprocess

===Acknowledgment===

===References===

Publications related to this module go here. Links to pdfs would be useful.

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 == More Information ==

Documentation/4.2/Modules/dtiaverage - Revision history

UpdateBot: Prepend documentation/versioncheck template. See http://na-mic.org/Mantis/view.php?id=2887

Fbudin: /* Usage */

Fbudin: Created page with '__NOTOC__ ===DTIAverage=== DTIAverage {| |User Interface |} == General Information == ===Module Type & Category=== Type: CLI Category: …'

Fbudin: Created page with 'NOTOC ===DTIAverage=== DTIAverage {| |User Interface |} == General Information == ===Module Type & Category=== Type: CLI Category: …'