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Text replacement - "slicerWiki/index.php" to "wiki"

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2018-10-19T00:46:17Z

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{{documentation/{{documentation/version}}/module-section|Introduction and Acknowledgements}}
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This work is part of the SparKit project, funded by An Applied Cancer Research Unit of Cancer Care Ontario with funds provided by the Ministry of Health and Long-Term Care and the Ontario Consortium for Adaptive Interventions in Radiation Oncology (OCAIRO) to provide free, open-source toolset for radiotherapy and related image-guided interventions.<br>
Author: Csaba Pinter (PerkLab, Queen's University)<br>
Contributor: Greg Sharp (Massachusetts General Hospital)<br>
Contact: Csaba Pinter, <email>pinter@cs.queensu.ca</email><br>
[http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SlicerRT Back to SlicerRT home]
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{{documentation/{{documentation/version}}/module-section|Module Description}}
The {{documentation/modulename}} module computes the difference between two co-registered dose volumes using the gamma dose distribution comparison method. This module uses the gamma Plastimatch algorithm internally.


{{documentation/{{documentation/version}}/module-section|Use Cases}}
Comparing dose distributions

{|align="center"
|[[File:20160121_DoseComparisonUI.png|thumb|499px|Dose Comparison module UI]]
|[[File:SlicerRT_0.11_Gamma.png|thumb|720px|Example of the result gamma volume]]
|}


{{documentation/{{documentation/version}}/module-section|Tutorials}}
See [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SlicerRT#Tutorials SlicerRT main page]


{{documentation/{{documentation/version}}/module-section|Panels and their use}}
* '''Reference dose volume:''' Dose distribution used as reference
* '''Evaluated dose volume:''' Dose distribution used as evaluation/compare
* '''Mask structure:''' Segmentation and contained segment within which the gamma index is calculated, but not outside (it will be 0)
* '''Distance-to-agreement (DTA):''' Mark dose voxel as failed if closest dose voxel with same value found in distance higher than this threshold, ''see Low paper below''
* '''Dose difference criteria:''' Mark dose voxel as failed if dose difference is equal or greater than this threshold, ''see Low paper below''
** '''Maximum value / Custom:''' Reference dose value for threshold can be either the maximum dose in the dose map, or a custom cGy value
* '''Do not calculate gamma values for voxels below analysis threshold'''
* '''Use linear interpolation'''
* '''Upper bound for gamma values:''' If gamma value would be higher than this value, the value will be set instead
* Dose threshold on reference only
* '''Gamma volume:''' Output volume to contain gamma map. Needs to be created using the combobox. Name will be automatically filled from the names of the input volumes



{{documentation/{{documentation/version}}/module-section|Similar Modules}}
[http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentComparison Segment Comparison]


{{documentation/{{documentation/version}}/module-section|References}}
* Low, D. A.; Harms, W. B.; Mutic, S. & Purdy, J. A. A technique for the quantitative evaluation of dose distributions Med. Phys, 1998, 25 (5), 656/6
* Low, D. A. & Dempsey, J. F. Evaluation of the gamma dose distribution comparison method Med. Phys, 2003, 30 (9), 2455/10


{{documentation/{{documentation/version}}/module-section|Information for Developers}}
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 Contributor: Greg Sharp (Massachusetts General Hospital)<br>
 Contact: Csaba Pinter, <email>pinter@cs.queensu.ca</email><br>
-[http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SlicerRT Back to SlicerRT home]
+[http://www.slicer.org/wiki/Documentation/Nightly/Extensions/SlicerRT Back to SlicerRT home]
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 {{documentation/{{documentation/version}}/module-introduction-logo-gallery
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-See [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SlicerRT#Tutorials SlicerRT main page]
+See [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/SlicerRT#Tutorials SlicerRT main page]
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 {{documentation/{{documentation/version}}/module-section|Similar Modules}}
-[http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentComparison Segment Comparison]
+[http://www.slicer.org/wiki/Documentation/Nightly/Modules/SegmentComparison Segment Comparison]
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Documentation/4.10/Modules/DoseComparison - Revision history

Unknown user: Text replacement - "slicerWiki/index.php" to "wiki"

UpdateBot: Nightly -> 4.10