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2019-11-27T07:20:18Z

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UpdateBot: Nightly -> 4.10

2018-10-19T00:44:37Z

Nightly -> 4.10

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{{documentation/{{documentation/version}}/module-section|Introduction and Acknowledgements}}
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Extension: [[Documentation/{{documentation/version}}/Extensions/OpenCVExample|OpenCVExample]]<br>
Acknowledgments:
This work was supported by a supplement to the Quantitative Image Informatics project via the NIH-National Cancer Institute Grant U24 CA180918-03 as well as U24 CA180924 Tools to Analyze Morphology and Spatially Mapped Molecular Data with Stony Brook University.<br>
Author: Nicole Aucoin ({{collaborator|name|spl}})<br>
Contact: Nicole Aucoin, <email>nicole@bwh.harvard.edu</email><br>
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{{documentation/{{documentation/version}}/module-section|Module Description}}
[[File:OpenCVExample.png|x200px]]

This extension provides an example on how to build and run against the OpenCV package provided by the
[[Documentation/{{documentation/version}}/Extensions/SlicerOpenCV | SlicerOpenCV extension]]. [http://opencv.org/ OpenCV] (Open Source Computer Vision Library) is an open source computer vision and machine learning software library.

This extension includes a C++ CLI module that loads, operates on, and saves PNG images.


{{documentation/{{documentation/version}}/module-section|Use Cases}}

* This module can be used as a template by extension developers who wish to use the algorithms provided by [http://opencv.org OpenCV].


{{documentation/{{documentation/version}}/module-section|Tutorials}}


{{documentation/{{documentation/version}}/module-section|Panels and their use}}

The ExampleOpenCV extension provides the [[Documentation/{{documentation/version}}/Extensions/BlendVectorVolumes|Blend Vector Volumes]] CLI as a stand alone module, but the extension does not provide an overall GUI.


{{documentation/{{documentation/version}}/module-section|Similar Modules}}

The [https://github.com/SBU-BMI/SlicerPathology Slicer Pathology] extension also uses the [[Documentation/{{documentation/version}}/Extensions/SlicerOpenCV | SlicerOpenCV extension]].


{{documentation/{{documentation/version}}/module-section|References}}
* [http://qiicr.org Quantitative Image Informatics for Cancer Research (QIICR)]
* [http://opencv.org Open Source Computer Vision]


{{documentation/{{documentation/version}}/module-section|Information for Developers}}
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Use this extension as a template on how to include OpenCV provided by the SlicerOpenCV module.

In your extension's top level CMakeList.txt:
* Specify that it depends on SlicerOpenCV:
set(EXTENSION_DEPENDS "SlicerOpenCV")
* Include the SlicerOpenCV extension by including this line after the find_package for Slicer:
find_package(SlicerOpenCV REQUIRED)
* If you're building from a locally built version of SlicerOpenCV, SlicerOpenCV_DIR is set to the inner-build sub-directory of the SlicerOpenCV build directory.

In your extension's module CMakeLists.txt file:
* Define OpenCV_DIR by finding the package that SlicerOpenCV provided:
find_package(OpenCV 3.1 REQUIRED)
* The header include path is defined as:
get_filename_component(OpenCV_INCLUDE_DIR ${OpenCV_DIR}/../../include ABSOLUTE)
* Add ${OpenCV_INCLUDE_DIR} to the MODULE_INCLUDE_DIRECTORIES list
* Link against the OpenCV libraries by adding ${OpenCV_LIBS} to the MODULE_TARGET_LIBRARIES


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 This work was supported by a supplement to the Quantitative Image Informatics project via the NIH-National Cancer Institute Grant U24 CA180918-03 as well as U24 CA180924 Tools to Analyze Morphology and Spatially Mapped Molecular Data with Stony Brook University.<br>
 Author: Nicole Aucoin ({{collaborator|name|spl}})<br>
-Contact: Nicole Aucoin, <email>nicole@bwh.harvard.edu</email><br>
+Contact: Nicole Aucoin, nicole{{@}}bwh.harvard.edu<br>
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Documentation/4.10/Extensions/OpenCVExample - Revision history

Grundlett: Text replacement - "(.*)@(.*)<\/email>" to "$1{{@}}$2"

UpdateBot: Nightly -> 4.10

Grundlett: Text replacement - "(.)@(.)<\/email>" to "$1{{@}}$2"