Documentation/4.1/Modules/Annotations - Revision history

UpdateBot: Prepend documentation/versioncheck template. See http://na-mic.org/Mantis/view.php?id=2887

2013-06-14T07:29:14Z

Prepend documentation/versioncheck template. See http://na-mic.org/Mantis/view.php?id=2887

2012-09-20T18:14:02Z

2012-07-25T15:51:46Z

Transforms

2012-06-29T19:31:35Z

Programmatic Access to Fiducials

2012-06-29T19:30:28Z

Programmatic Access to Fiducials

2012-06-08T21:15:34Z

2012-06-08T21:15:04Z

2012-06-08T21:04:57Z

2012-04-12T23:00:55Z

2012-04-12T22:48:55Z

← Older revision		Revision as of 07:29, 14 June 2013
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		+	<noinclude>{{documentation/versioncheck}}</noinclude>
	<!-- ---------------------------- -->		<!-- ---------------------------- -->
	{{documentation/{{documentation/version}}/module-header}}		{{documentation/{{documentation/version}}/module-header}}

@@ Line 34: / Line 34: @@
 * Use Case 3: using rulers to measure tumor diameters
 * Use Case 4: using ROIs to crop volume rendering
 <!-- ---------------------------- -->

@@ Line 68: / Line 68: @@
 {{documentation/{{documentation/version}}/module-section|Information for Developers}}
 {{documentation/{{documentation/version}}/module-developerinfo}}
 === Transforms ===
@@ Line 75: / Line 97: @@
    listNodeID = "vtkMRMLAnnotationHierarchyNode3"
 Then use this code snippet to apply the transform to all the annotations under the hierarchy node:
-   annotationlHierarchyNode = slicer.mrmlScene.GetNodeByID(listNodeID)
+   annotationHierarchyNode = slicer.mrmlScene.GetNodeByID(listNodeID)
    numNodes = annotationHierarchyNode.GetNumberOfChildrenNodes()
    for i in range(numNodes):

@@ Line 91: / Line 91: @@
     vtkIntArray *events = vtkIntArray::New();
     events->InsertNextValue(vtkMRMLScene::NodeAddedEvent);
-    // add here more events you can be interested in such as vtkMRMLScene::NodeRemovedEvent
+    // Optionally you can add here more events
     this->SetAndObserveMRMLSceneEventsInternal(newScene, events);
     events->Delete();
@@ Line 107: / Line 108: @@
+      }
+    }
 ===Selection and interaction===
 This section indicates how to change in the GUI the mouse placing mode to start placing nodes.

@@ Line 84: / Line 84: @@
 === Programmatic Access to Fiducials ===
-This section started out as tips to a developer who wanted to trigger the Slicer GUI to go into fiducial placement mode, and then access the newly added fiducials:
+This section explains how to access fiducial nodes added into the scene by the user.
 For the selection and interaction nodes, make sure that you access the singleton nodes already in the scene (rather than making your own) via (caveat: this call works on displayable managers, you may have to go a different route to get at the application logic):
    vtkMRMLApplicationLogic *mrmlAppLogic = this->GetMRMLApplicationLogic();

@@ Line 82: / Line 82: @@
 * [[Documentation/{{documentation/version}}/Modules/Transforms#Information_for_Developers|Read more]] about transforming MRML nodes
-=== Programatic Access to Fiducials ===
+=== Programmatic Access to Fiducials ===
 This section started out as tips to a developer who wanted to trigger the Slicer GUI to go into fiducial placement mode, and then access the newly added fiducials:

@@ Line 69: / Line 69: @@
 {{documentation/{{documentation/version}}/module-developerinfo}}
 Individual annotations are transformable (able to be placed under a transform node), but lists are not. In order to apply a transform to a set of annotations, open the python console (View -> Python Interctor) and use the following code. First you'll need to get the transform node MRML id from the Data module (click on Display MRML IDs), and save it to a variable:
    transformNodeID = "vtkMRMLLinearTransformNode5"
@@ Line 79: / Line 80: @@
      annotation = annotationHierarchyNode.GetNthChildNode(i).GetAssociatedNode()
      annotation.SetAndObserveTransformNodeID(transformNodeID)
 <!-- ---------------------------- -->
 {{documentation/{{documentation/version}}/module-footer}}
 <!-- ---------------------------- -->

@@ Line 49: / Line 49: @@
 {|
-|[[Image:Slicer4-Annotations-GUI.jpeg|thumb|200px|Annotations]]
+|[[Image:Slicer4-1-Annotations-GUI.jpeg|thumb|200px|Annotations]]
 |[[Image:Slicer4-Annotations-ModifyPropeties.jpeg|thumb|200px|Modify Annotation Properties]]
 |[[Image:Slicer4-Annotations-ModifyHierarchy.jpeg|thumb|200px|Modify Hierarchy Properties]]