Documentation/4.0/Modules/PETStandardUptakeValueComputation - Revision history

UpdateBot: Prepend documentation/versioncheck template. See http://na-mic.org/Mantis/view.php?id=2887

2013-06-14T07:33:46Z

Prepend documentation/versioncheck template. See http://na-mic.org/Mantis/view.php?id=2887

JChris.FillionR at 10:36, 2 February 2012

2012-02-02T10:36:10Z

JChris.FillionR: moved Documentation/4.0/Modules/ComputeSUVBodyWeight to Documentation/4.0/Modules/PETStandardUptakeValueComputation

2012-02-02T06:30:12Z

moved Documentation/4.0/Modules/ComputeSUVBodyWeight to Documentation/4.0/Modules/PETStandardUptakeValueComputation

Nicole at 17:59, 25 November 2011

2011-11-25T17:59:50Z

Nicole at 23:05, 22 November 2011

2011-11-22T23:05:58Z

Nicole at 23:04, 22 November 2011

2011-11-22T23:04:38Z

Nicole: moved Documentation/4.0/Modules/SUVComputation to Documentation/4.0/Modules/ComputeSUVBodyWeight: match name to source directory

2011-11-22T23:00:15Z

moved Documentation/4.0/Modules/SUVComputation to Documentation/4.0/Modules/ComputeSUVBodyWeight: match name to source directory

Nicole at 22:58, 22 November 2011

2011-11-22T22:58:07Z

Wjp at 21:50, 19 November 2011

2011-11-19T21:50:59Z

Wjp at 21:48, 19 November 2011

2011-11-19T21:48:39Z

← Older revision		Revision as of 07:33, 14 June 2013
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 [[documentation/{{documentation/version}}/Modules/{{documentation/modulename}}#References|references]] gives more details on the algorithm.
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 {|
 |[[Image:Slicer4-SUV-2.jpeg|thumb|280px|GUI]]
-|{{documentation/{{documentation/version}}/module-parametersdescription|xmlurl={{documentation/{{documentation/version}}/module-cli-xmlurl|{{documentation/modulename}}|18733}} }}
+|{{documentation/{{documentation/version}}/module-parametersdescription}}
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-{{documentation/{{documentation/version}}/module-developerinfo|ModuleTemplate|type=CLI|category=Quantification}}
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-{{documentation/{{documentation/version}}/module-footer|category=Quantification}}
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 This module does not visualize the functional and structural dataset. Instead, it saves all measurements to the csv file as well as showing the following quantitative measures in Slicer's interface: label name, label value, SUV max, SUV mean, SUV minimum.
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 {{documentation/{{documentation/version}}/module-section|Panels and their use}}
-A list of all the panels in the interface, their features, what they mean, and how to use them. For instance:
+{|
-{{documentation/{{documentation/version}}/module-parametersdescription|xmlurl={{documentation/{{documentation/version}}/module-cli-xmlurl|{{documentation/modulename}}|18733}} }}
+|[[Image:Slicer4-SUV-2.jpeg|thumb|280px|GUI]]
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 <!-- THE FOLLOWING SHOULD BE REMOVED FOR YOUR OWN MODULE DOCUMENTATION -->
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-{{documentation/{{documentation/version}}/module-description|xmlurl={{documentation/{{documentation/version}}/module-cli-xmlurl|{{documentation/modulename}}|18730}} }}
+{{documentation/{{documentation/version}}/module-description|xmlurl={{documentation/{{documentation/version}}/module-cli-xmlurl|{{documentation/modulename}}|18733}} }}
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 A list of all the panels in the interface, their features, what they mean, and how to use them. For instance:
-{{documentation/{{documentation/version}}/module-parametersdescription|xmlurl={{documentation/{{documentation/version}}/module-cli-xmlurl|{{documentation/modulename}}|18730}} }}
+{{documentation/{{documentation/version}}/module-parametersdescription|xmlurl={{documentation/{{documentation/version}}/module-cli-xmlurl|{{documentation/modulename}}|18733}} }}
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-{{documentation/{{documentation/version}}/module-category|xmlurl={{documentation/{{documentation/version}}/module-cli-xmlurl|{{documentation modulename}}|18730}} }}
+{{documentation/{{documentation/version}}/module-category|xmlurl={{documentation/{{documentation/version}}/module-cli-xmlurl|{{documentation modulename}}|18733}} }}
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@@ Line 50: / Line 50: @@
 A list of all the panels in the interface, their features, what they mean, and how to use them. For instance:
+{{documentation/{{documentation/version}}/module-parametersdescription|xmlurl={{documentation/{{documentation/version}}/module-cli-xmlurl|{{documentation/modulename}}|18730}} }}
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← Older revision	Revision as of 06:30, 2 February 2012
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← Older revision	Revision as of 23:00, 22 November 2011
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 This work is part of the National Alliance for Medical Image Computing (NA-MIC), funded by the National Institutes of Health through the NIH Roadmap for Medical Research, Grant U54 EB005149. Information on NA-MIC can be obtained from the [http://www.na-mic.org/ NA-MIC website].<br>
 Author: Wendy Plesniak, SPL<br>
-Contributor1: FIRSTNAME LASTNAME, AFFILIATION<br>
+Contributor1: Ron Kikinis, SPL<br>
-Contributor2: FIRSTNAME LASTNAME, AFFILIATION<br>
+Contributor2: Nicole Aucoin, SPL<br>
 Contact: Wendy Plesniak, <email>wjp@bwh.harvard.edu</email><br>
 {{documentation/{{documentation/version}}/module-introduction-row}}
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 <!-- ---------------------------- -->
 {{documentation/{{documentation/version}}/module-section|Module Description}}
-Here comes a description what the module is good for. Explain briefly how it works and point to the [[documentation/{{documentation/version}}/Modules/{{documentation/modulename}}#References|references]] giving more details on the algorithm.
+Computes the standardized uptake value based on body weight.
 <!-- ----------------------------------------------------------------- -->
 <!-- THE FOLLOWING SHOULD BE REMOVED FOR YOUR OWN MODULE DOCUMENTATION -->
 <!-- ----------------------------------------------------------------- -->
-If you are documenting a CLI, the description should be extracted from the corresponding XML description. This could be done automatically using the following wiki template:<pre>{{documentation/{{documentation/version}}/module-description|xmlurl=http://path/to/YOURMODULE.xml }}</pre>
+{{documentation/{{documentation/version}}/module-description|xmlurl={{documentation/{{documentation/version}}/module-cli-xmlurl|{{documentation/modulename}}|18730}} }}
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 {{documentation/{{documentation/version}}/module-section|Use Cases}}
-This command line module was developed for a special use case in which many different VOIs were specified on the fused structural and PET images; SUVmax, SUVin were computed for each of these labels and the resulting quanitative measures were output to a comma-separated value (csv) file of the user's choosing.
+This command line module was developed for a special use case in which many different VOIs were specified on the fused structural and PET images; SUV maximum, SUV minimum, SUV mean were computed for each of these labels and the resulting quanitative measures were output to a comma-separated value (csv) file of the user's choosing.
-Since various study parameters for the datasets are required for these measurements, a parameter file is also provided to the computation. This parameter file contains information either previously extracted from the DICOM header or from other study records.
+Since various study parameters for the datasets are required for these measurements, a pointer to the DICOM directory is also provided to the computation.
-This module does not visualize the functional and structural dataset, nor does it show resulting quantitative measures in Slicer's interface. Instead, it saves all measurements to the csv file.
+This module does not visualize the functional and structural dataset. Instead, it saves all measurements to the csv file as well as showing the following quantitative measures in Slicer's interface: label name, label value, SUV max, SUV mean, SUV minimum.
 <!-- ---------------------------- -->
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 A list of all the panels in the interface, their features, what they mean, and how to use them. For instance:
 {|style="width: 100%"
+|
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+|
+}
 <!-- ---------------------------- -->
 {{documentation/{{documentation/version}}/module-section|Similar Modules}}
-* Point to other modules that have similar functionality
+* The Slicer3 PETCTFusion module formed the basis of this module.
 <!-- ---------------------------- -->
 {{documentation/{{documentation/version}}/module-section|References}}
-Publications related to this module go here. Links to pdfs would be useful.
+Publications related to this module:
 <!-- ---------------------------- -->
 {{documentation/{{documentation/version}}/module-section|Information for Developers}}
-{{documentation/{{documentation/version}}/module-developerinfo|ModuleTemplate|type=Interactive|category=Example}}
+{{documentation/{{documentation/version}}/module-developerinfo|ModuleTemplate|type=CLI|category=Quantification}}
-Using this later template, the final syntax would be:
+{{documentation/{{documentation/version}}/module-category|xmlurl={{documentation/{{documentation/version}}/module-cli-xmlurl|{{documentation modulename}}|18730}} }}
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-{{documentation/{{documentation/version}}/module-footer|category=Example}}
+{{documentation/{{documentation/version}}/module-footer|category=Quantification}}
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 * Viewing panel:
 | align="right" |
-[[Image:screenshotBlankNotOptional.png|thumb|280px|Name of panel 1]]
+[[Image:computeSUVBodyWeightUI.png|thumb|280px|Compute SUV Body Weight 1]]
 |-
+|
-* Input panel2:
 <!-- ---------------------------- -->