Slicer-3.6-QA

2010-05-01T22:15:35Z

Ibanez: /* Application CLI Modules */

Slicer-3.6-QA-2010-04-29

2010-05-01T22:13:18Z

Ibanez:

= Application / CLI Modules =

{|class="wikitable sortable labelpage labelpagetable" border="1" style="text-align:center"
|+ <big>Slicer 3.6 Quality Assurance</big>
|-
!Score!!Name!!Documentation!!Help <ref>including link to website documentation</ref>!!Acknowledgment <ref>including name of author and of supervisor</ref> !!Test coverage <ref>in % for non-interactive part</ref>!!valgrind errors!!Current Owner!!Comments <ref>Test coverage percentage determined by: [# lines code covered / total # lines of code (covered and non-covered) *100] of relevant .cxx and .h files</ref>!!3.6 Documentation Name <ref>http://wiki.slicer.org/slicerWiki/index.php/Documentation-3.6</ref>
|-
|style="background:gold"|1Gold||style="width:33%"|my module||complete||yes and yes||yes, yes, yes||80%||0|| ||||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| DiffusionWeightedTest ||no||no||yes and yes|| 69.8% || 0||CF Westin||||n/a||
|-
|style="background:silver"|2Silver||style="width:33%"| DiffusionTensorEstimation || complete ||yes and no||yes and yes|| 79.7% || 9 ||CF Westin||||same||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| DiffusionTensorMathematics ||no||yes and no||yes and yes|| 56.2% || 5||CF Westin||||Diffusion Tensor Scalar Measurements||
|-
|style="background:gold"|1Gold||style="width:33%"| OrientImage ||complete||yes and yes||yes and yes|| 85.7% || 0 ||Bill Lorensen||||OrientImages||
|-
|style="background:darkgoldenrod"|3Bronze||style="width:33%"| LinearRegistration ||complete||yes and no||yes and yes|| 66.7% || 4 ||Daniel Blezek||||same||
|-
|style="color:white; background:black"|5Coal||style="width:33%"| RigidRegistration ||complete||yes and yes||yes and yes||style="background:red"| 1.0% || 92 ||Daniel Blezek||||same||
|-
|style="background:gold"|1Gold||style="width:33%"| RegisterImages (RegisterImagesMultiRes) ||complete||yes and yes||yes and yes|| 83.5% || Unknown || Casey Goodlett, Stephen Aylward||||same||
|-
|style="color:white; background:black"|5Coal||style="width:33%"| Fast Affine Registration ||complete||yes and no||yes and yes||style="background:red" |1.4% || 82 || Daniel Blezek||||same||
|-
|style="background:gold"|1Gold||style="width:33%"| BSplineDeformableRegistration ||complete||yes and yes||yes and yes|| 82.3% || 6 || Bill Lorensen||||Fast Nonrigid BSpline Registration||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| TestGridTransformRegistration ||no||no||yes and yes || 90.7% || 0 ||Yinglin Lee||||n/a||
|-
|style="background:darkgoldenrod"|3Bronze||style="width:33%"| CheckerBoard ||complete||yes and yes||yes and yes|| 67.4% || 0 ||Bill Lorensen||||CheckerBoard Filter||
|-
|style="background:darkorange"|4Clay||style="width:33%"| ResampleVolume ||complete||yes and yes||yes and yes|| 57.1% || 0 ||Bill Lorensen||||same||
|-
|style="background:gold"|1Gold||style="width:33%"| PolyDataToLabelmap ||complete||yes and yes||yes and yes|| 87.9% || 0 ||Nicole Aucoin, Xiaodong Tao||||same||
|-
|style="background:darkorange"|4Clay||style="width:33%"| GaussianBlurImageFilter ||complete||yes and no||yes and yes|| 55.9% || 0 ||Julien Jomier, Stephen Aylward||||Gaussian Blur||
|-
|style="background:gold"|1Gold||style="width:33%"| ConfidenceConnected||complete||yes and no||yes and yes|| 87.5% || 0 ||Jim Miller||||Simple region growing||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| ExecutionModelTour ||no||yes and yes||yes and yes|| 87.2% || 0 ||Daniel Blezek, Bill Lorensen||||n/a||
|-
|style="background:gold"|1Gold||style="width:33%"| ImageReadDicomWrite ||complete||yes and yes||yes and yes|| 86.1% || 0 ||Bill Lorensen||||Create a Dicom Series||
|-
|style="background:darkgoldenrod"|3Bronze||style="width:33%"| CurvatureAnisotropicDiffusion ||complete||yes and yes||yes and yes|| 64.3% || 0 ||Bill Lorensen||||same||
|-
|style="background:darkgoldenrod"|3Bronze||style="width:33%"| GradientAnisotropicDiffusion ||complete||yes and yes||yes and yes|| 63.4% || 0 ||Bill Lorensen||||GradientAnisotropicFilter||
|-
|style="background:darkorange"|4Clay||style="width:33%"| MedianImageFilter ||complete||yes and yes||yes and yes|| 51.1% || 0 ||Bill Lorensen||||same||
|-
|style="background:darkgoldenrod"|3Bronze||style="width:33%"| HistogramMatching ||complete||yes and yes||yes and yes|| 65.0% || 0 ||Bill Lorensen||||same||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| OtsuThresholdImageFilter ||no||yes and yes||yes and yes|| 100% || 0 ||Bill Lorensen||||OtsuThreshold||
|-
|style="background:gold"|1Gold||style="width:33%"| OtsuThresholdSegmentation ||complete||yes and no||yes and yes|| 90.9% || 0 ||Bill Lorensen||||same||
|-
|style="background:silver"|2Silver||style="width:33%"| Subtract ||complete||yes and yes||yes and yes|| 71.7% || 0 ||Bill Lorensen||||SubtractImages||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| Multiply ||yes||yes and yes||yes and yes|| 77.6% || 0 ||Bill Lorensen||||MultiplyImages||
|-
|style="background:gold"|1Gold||style="width:33%"| Add ||complete||yes and yes||yes and yes|| 84.9% || 0 ||Bill Lorensen||||AddImages||
|-
|style="background:darkgoldenrod"|3Bronze||style="width:33%"| Threshold ||complete||yes and yes||yes and yes|| 55.8% || 0 ||Nicole Aucoin||||ThresholdImage||
|-
|style="background:gold"|1Gold||style="width:33%"| Mask ||complete||yes and yes||yes and yes|| 80.0% || 0 ||Nicole Aucoin||||Mask Image||
|-
|style="color:white; background:black"|5Coal||style="width:33%"| Cast ||complete||yes and yes||yes and yes||style="background:red"| 14.6% || 0 ||Nicole Aucoin||||Cast Image||
|-
|style="background:gold"|1Gold||style="width:33%"| VotingBinaryHoleFillingImageFilter ||complete||yes and yes||yes and yes|| 100% || 0 ||Bill Lorensen||||Voting Binary Hole Filling||
|-
|style="background:darkorange"|4Clay||style="width:33%"| ModelMaker ||complete||yes and yes||yes and yes|| 57.4% || 1 ||Nicole Aucoin||||same||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| MultipleModelsExample ||no||yes and no||yes and yes||style="background:red"| 1.9%|| 50 ||Bill Lorensen||||n/a||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| GrayscaleModelMaker ||no||yes and no||yes and yes|| 82.1% || 1 ||Bill Lorensen||||same||
|-
|style="background:darkgoldenrod"|3Bronze||style="width:33%"| MergeModels ||yes||yes and yes||yes and yes|| 62.7% || 0 ||Nicole Aucoin, Daniel Haehn||||same||
|-
|style="background:darkorange"|4Clay||style="width:33%"| GrayscaleFillHoleImageFilter ||complete||yes and yes||yes and yes|| 57.1% || 0 ||Bill Lorensen||||Grayscale Fill Hole||
|-
|style="background:darkgoldenrod"|3Bronze||style="width:33%"| GrayscaleGrindPeakImageFilter ||complete||yes and yes||yes and yes|| 64.5% || 0 ||Bill Lorensen||||Grayscale Grind Peak||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| LabelMapSmoothing ||no||yes and no||yes and yes|| 87.9% || 0 ||Dirk Padfield, Josh Cates, Ross Whitaker||||n/a||
|-
|style="color:white; background:black"|5Coal||style="width:33%"| ImageLabelCombine ||complete||yes and no||yes and no||style="background:red"| 7.5% || 50 ||Alex Yarmarkovich||||same||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| ResampleVolume2 ||no||yes and yes||yes and yes||style="background:red"| 46.8% || 0 ||Francois Budin||||Resample Scalar/Vector/DWI Volume||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| ZeroCrossingBasedEdgeDetectionImageFilter ||no||yes and no||yes and yes|| 62.5%|| 0 || Elliot Uvero||||n/a||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| FreesurferSurfaceSectionExtraction ||no||yes and no||yes and yes|| 60.0% || 62 || Sylvain Bouix||||n/a/||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| BRAINSDemonWarp ||complete||yes and no||yes and no|| style="background:red"| 0.0% || Unknown ||Hans Johnson, Greg Harris ||||same||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| BRAINSFit ||complete||yes and yes||yes and yes|| style="background:red"| 0.0% || Unkown || Eun Young Kim||||same||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| BRAINSMush ||complete||no||no|| style="background:red"| 0.0% || Unknown || Hans Johnson||||same||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| BRAINSResample ||no||yes and yes||yes and no|| style="background:red"| 0.0% || Unknown || Hans Johnson||||n/a||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| BRAINSROIAuto ||no||yes and no||yes and no|| style="background:red"| 0.0% || Unknown || Hans Johnson||||n/a||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| DiffusionTensorEstimation BatchMake ||no||yes and no||yes and no|| style="background:red"| 0.0% || Unknown || Lauren O'Donnell||||n/a||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| EMSegment BatchMake||complete||yes and yes||yes and yes|| style="background:red"| 0.0% || Unknown || Julien Jomier, Stephen Aylward, Brad Davis||||EM Segmenter batch||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| Gaussian Blur BatchMake ||complete||yes and yes||yes and yes|| style="background:red"| 0.0% || Unknown || Julien Jomier, Stephen Aylward, Julien Finet||||Gaussian Blur batch||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| RegisterImages BatchMake ||complete||yes and yes||yes and yes|| style="background:red"| 0.0% || Unknown ||Stephen Aylward, Julien Finet||||Register Images batch||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| ResampleScalarVolume BatchMake ||complete||yes and yes||yes and yes|| style="background:red"| 0.0% || Unknown ||Julien Finet||||Resample Volume batch||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| Diffeomorphic Demons Algorithm ||no||no||yes and yes|| style="background:red"| 0.0% || Unknown ||Tom Vercauteren, Ender Konukoglu, Kilian Pohl||||n/a||
|-
|style="color:white; background:black"|5Coal||style="width:33%"| ResampleDTIVolume ||complete||yes and yes||yes and yes|| style="background:red"| 37.0% || 0 ||Francois Budin||||same||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| Rician LMMSE Image Filter ||complete||yes and no||yes and yes|| style="background:red"| 0.0% || Unknown ||Antonio Tristan Vega, Santiago Aja Fernandez, Marc Niethammer||||same||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| Unbiased Non Local Means filter for DWI ||complete||yes and no||yes and yes|| style="background:red"| 0.0% || Unknown ||Antonio Tristán Vega, Santiago Aja-Fernandez||||n/a||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| Joint Rician LMMSE Image Filter ||complete||yes and no||yes and yes|| style="background:red"| 0.0% || Unknown ||Antonio Tristán Vega, Santiago Aja Fernández||||same||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| Extract Skeleton ||no||yes and no||no and yes|| style="background:red"| 0.0% || Unknown ||Pierre Seroul, Martin Styner, Guido Gerig, Stephen Aylward||||n/a||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| MRI Bias Field Correction ||complete||yes and yes||yes and yes|| style="background:red"| 0.0% || Unknown ||Sylvain Jaume||||same||
|-
|style="color:white; background:black"|5Coal||style="width:33%"| N4ITK MRI Bias Correction ||yes||yes and yes||yes and yes|| style="background:red"| 0.0% || Unknown ||Andriy Fedorov||||same||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| ACPC Transform ||complete||yes and yes||yes and yes|| style="background:red"| 0.0% || Unknown ||Nicole Aucoin||||same||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| Mesh Contour Segmentation ||complete||yes and yes||yes and yes|| style="background:red"| 0.0% ||Unknown||Peter Karasev, Karol Chudy, Allen Tannenbaum||||same||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| Utah BSpline Deformable registration ||no||yes and no||yes and yes|| style="background:red"| 0.0% ||Unknown||Sam Gerber, Jim Miller, Steve Pieper, Ross Whitaker||||n/a||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| Calculate Volume Statistics ||no||no||no|| style="background:red"| 0.0% ||0||Tri Ngo||||n/a||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| Generate Connectivity Map ||no||no||no||style="background:red"| 0.0% || Unknown ||Tri Ngo||||n/a||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| ROI Tract Filter ||no||no||no||style="background:red"| 0.0% || Unknown ||Tri Ngo||||n/a||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| Stochastic Tractography Filter ||no||no||no||style="background:red"| 0.0% || Unknown||Tri Ngo||||n/a||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| MIDAS Data and Slicer Tutorials ||no||yes and no||yes and no|| style="background:red"| 0.0% ||Unknown||Patrick Reynolds, Stephen Aylward||||n/a||
|-
|}

<references/>

=Luis Ibanez' scoring system=

The following scoring will be applied to the '''data processing''' sections of all modules:

{|class="wikitable sortable labelpage labelpagetable" border="1" style="text-align:center"
|+ <big>Slicer 3.6 Quality Assurance Scoring</big>
|-
!Score!!Code Coverage!!Valgrind Errors!!Documentation!!Tutorial
|-
|style="background:gold"| '''1Gold''' || > 80% || 0 ||yes || yes
|-
|style="background:silver"| '''2Silver''' || > 70% || < 10 ||yes || yes
|-
|style="background:darkgoldenrod"| '''3Bronze''' || > 60% || < 50 ||yes || yes
|-
|style="background:darkorange"| '''4Clay''' || > 50% || < 100 ||yes || yes
|-
|style="color:white; background:black"| '''5Coal''' ||style="background:red"|< 50% || > 100 || yes || yes
|-
|style="color:white; background:hotpink"| '''6Hazard''' || unknown || unknown || no || no
|}

The code coverage and Valgrind error must be the ones reported on the Nightly Slicer Dashboard. Anecdotal data is not acceptable.

Slicer-3.6-QA

2010-05-01T22:12:58Z

Ibanez: /* Application CLI Modules */

2010-04-29T03:49:51Z

Ibanez: /* Application CLI Modules */

[[Documentation-3.6|Return to Slicer 3.6 documentation]]

*This page contains our assessment of the Slicer 3.6 modules

*See also the [http://wiki.na-mic.org/Wiki/index.php/2010_Slicer36_Module_Cull module culling event] at the end of April 2010

= Testing Status =

== Core Modules ==

{|class="wikitable" border="1" style="text-align:center"
|+ <big>Slicer 3.6 Quality Assurance</big>
|-
!Score!!Name!!Documentation!!Help <ref>including link to website documentation</ref>!!Acknowledgment <ref>including name of author and of supervisor</ref> !!Current Owner
|-
|style="background:white"|??||style="width:33%"| Camera ||complete||yes, no link||no|| Sebastien Barre
|-
|style="background:white"|??||style="width:33%"| Volumes ||complete||yes and yes||yes and yes ||Steve Pieper
|-
|style="background:white"|??||style="width:33%"| Diffusion Editor ||complete||yes and yes||no|| CF Westin
|-
|style="background:white"|??||style="width:33%"| Models ||complete||yes and yes||yes and yes|| Alex Yarmarkovich
|-
|style="background:white"|??||style="width:33%"| Measurements ||complete||yes and yes||yes and yes|| Nicole Aucoin
|-
|style="background:white"|??||style="width:33%"| Fiducials||complete||yes and yes||yes and yes|| Nicole Aucoin
|-
|style="background:white"|??||style="width:33%"| Data ||complete||yes and yes||yes and yes ||Steve Pieper
|-
|style="background:white"|??||style="width:33%"| Slices ||complete||yes and yes||yes and yes|| Jim Miller
|-
|style="background:white"|??||style="width:33%"| Colors ||complete||yes and yes||yes and yes|| Nicole Aucoin
|-
|style="background:white"|??||style="width:33%"| Interactive Editor ||complete||no and yes ||yes and no || Steve Pieper
|-
|style="background:white"|??||style="width:33%"| ROI Module ||complete||no and yes||no and yes|| Alex Yarmarkovich
|-
|style="background:white"|??||style="width:33%"| Volume Rendering ||complete||yes and yes||no and yes|| Yanling Liu
|-
|style="background:white"|??||style="width:33%"| PET/CT Fusion ||complete||yes and yes||yes and yes|| Wendy Plesniak
|-
|}
<references/>

== Application CLI Modules ==

{|class="wikitable sortable labelpage labelpagetable" border="1" style="text-align:center"
|+ <big>Slicer 3.6 Quality Assurance</big>
|-
!Score!!Name!!Documentation!!Help <ref>including link to website documentation</ref>!!Acknowledgment <ref>including name of author and of supervisor</ref> !!Test coverage <ref>in % for non-interactive part</ref>!!valgrind errors!!Current Owner!!Comments <ref>Test coverage percentage determined by: [# lines code covered / total # lines of code (covered and non-covered) *100] of relevant .cxx and .h files</ref>!!3.6 Documentation Name <ref>http://wiki.slicer.org/slicerWiki/index.php/Documentation-3.6</ref>
|-
|style="background:gold"|1Gold||style="width:33%"|my module||complete||yes and yes||yes, yes, yes||80%||0|| ||||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| DiffusionWeightedTest ||no||no||yes and yes|| 69.8% || 0||CF Westin||||n/a||
|-
|style="background:silver"|2Silver||style="width:33%"| DiffusionTensorEstimation || complete ||yes and no||yes and yes|| 79.7% || 9 ||CF Westin||||same||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| DiffusionTensorMathematics ||no||yes and no||yes and yes|| 56.2% || 5||CF Westin||||Diffusion Tensor Scalar Measurements||
|-
|style="background:gold"|1Gold||style="width:33%"| OrientImage ||complete||yes and yes||yes and yes|| 85.7% || 0 ||Bill Lorensen||||OrientImages||
|-
|style="background:darkgoldenrod"|3Bronze||style="width:33%"| LinearRegistration ||complete||yes and no||yes and yes|| 66.7% || 4 ||Daniel Blezek||||same||
|-
|style="color:white; background:black"|5Coal||style="width:33%"| RigidRegistration ||complete||yes and yes||yes and yes||style="background:red"| 1.0% || 92 ||Daniel Blezek||||same||
|-
|style="background:white"|7??||style="width:33%"| RegisterImages (RegisterImagesMultiRes) ||complete||yes and yes||yes and yes|| || || Casey Goodlett, Stephen Aylward||||same||
|-
|style="color:white; background:black"|5Coal||style="width:33%"| Fast Affine Registration ||complete||yes and no||yes and yes||style="background:red" |1.4% || 82 || Daniel Blezek||||same||
|-
|style="background:gold"|1Gold||style="width:33%"| BSplineDeformableRegistration ||complete||yes and yes||yes and yes|| 82.3% || 6 || Bill Lorensen||||Fast Nonrigid BSpline Registration||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| TestGridTransformRegistration ||no||no||yes and yes || 90.7% || 0 ||Yinglin Lee||||n/a||
|-
|style="background:darkgoldenrod"|3Bronze||style="width:33%"| CheckerBoard ||complete||yes and yes||yes and yes|| 67.4% || 0 ||Bill Lorensen||||CheckerBoard Filter||
|-
|style="background:darkorange"|4Clay||style="width:33%"| ResampleVolume ||complete||yes and yes||yes and yes|| 57.1% || 0 ||Bill Lorensen||||same||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| PolyDataToLabelmap ||no||yes and yes||yes and yes|| 87.9% || 0 ||Nicole Aucoin, Xiaodong Tao||||n/a||
|-
|style="background:darkorange"|4Clay||style="width:33%"| GaussianBlurImageFilter ||complete||yes and no||yes and yes|| 55.9% || 0 ||Julien Jomier, Stephen Aylward||||Gaussian Blur||
|-
|style="background:gold"|1Gold||style="width:33%"| ConfidenceConnected||complete||yes and no||yes and yes|| 87.5% || 0 ||Jim Miller||||Simple region growing||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| ExecutionModelTour ||no||yes and yes||yes and yes|| 87.2% || 0 ||Daniel Blezek, Bill Lorensen||||n/a||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| ImageReadDicomWrite ||no||yes and yes||yes and yes|| 86.1% || 0 ||Bill Lorensen||||Create a Dicom Series||
|-
|style="background:darkgoldenrod"|3Bronze||style="width:33%"| CurvatureAnisotropicDiffusion ||complete||yes and yes||yes and yes|| 64.3% || 0 ||Bill Lorensen||||same||
|-
|style="background:darkgoldenrod"|3Bronze||style="width:33%"| GradientAnisotropicDiffusion ||complete||yes and yes||yes and yes|| 63.4% || 0 ||Bill Lorensen||||GradientAnisotropicFilter||
|-
|style="background:darkorange"|4Clay||style="width:33%"| MedianImageFilter ||complete||yes and yes||yes and yes|| 51.1% || 0 ||Bill Lorensen||||same||
|-
|style="background:darkgoldenrod"|3Bronze||style="width:33%"| HistogramMatching ||complete||yes and yes||yes and yes|| 65.0% || 0 ||Bill Lorensen||||same||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| OtsuThresholdImageFilter ||no||yes and yes||yes and yes|| 100% || 0 ||Bill Lorensen||||OtsuThreshold||
|-
|style="background:gold"|1Gold||style="width:33%"| OtsuThresholdSegmentation ||complete||yes and no||yes and yes|| 90.9% || 0 ||Bill Lorensen||||same||
|-
|style="background:silver"|2Silver||style="width:33%"| Subtract ||complete||yes and yes||yes and yes|| 71.7% || 0 ||Bill Lorensen||||SubtractImages||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| Multiply ||no||yes and no||yes and yes|| 77.6% || 0 ||Bill Lorensen||||n/a||
|-
|style="background:gold"|1Gold||style="width:33%"| Add ||complete||yes and yes||yes and yes|| 84.9% || 0 ||Bill Lorensen||||AddImages||
|-
|style="background:darkgoldenrod"|3Bronze||style="width:33%"| Threshold ||complete||yes and no||yes and yes|| 55.8% || 0 ||Nicole Aucoin||||ThresholdImage||
|-
|style="background:gold"|1Gold||style="width:33%"| Mask ||complete||yes and no||yes and yes|| 80.0% || 0 ||Nicole Aucoin||||Mask Image||
|-
|style="color:white; background:black"|5Coal||style="width:33%"| Cast ||complete||yes and no||yes and yes||style="background:red"| 14.6% || 0 ||Nicole Aucoin||||Cast Image||
|-
|style="background:gold"|1Gold||style="width:33%"| VotingBinaryHoleFillingImageFilter ||complete||yes and yes||yes and yes|| 100% || 0 ||Bill Lorensen||||Voting Binary Hole Filling||
|-
|style="background:darkorange"|4Clay||style="width:33%"| ModelMaker ||complete||yes and yes||yes and yes|| 57.4% || 1 ||Nicole Aucoin||||same||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| MultipleModelsExample ||no||yes and no||yes and yes||style="background:red"| 1.9%|| 50 ||Nicole Aucoin||||n/a||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| GrayscaleModelMaker ||no||yes and no||yes and yes|| 82.1% || 1 ||Bill Lorensen||||same||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| MergeModels ||no||yes and yes||yes and yes|| 62.7% || 0 ||Nicole Aucoin, Daniel Haehn||||same||
|-
|style="background:darkorange"|4Clay||style="width:33%"| GrayscaleFillHoleImageFilter ||complete||yes and yes||yes and yes|| 57.1% || 0 ||Bill Lorensen||||Grayscale Fill Hole||
|-
|style="background:darkgoldenrod"|3Bronze||style="width:33%"| GrayscaleGrindPeakImageFilter ||complete||yes and yes||yes and yes|| 64.5% || 0 ||Bill Lorensen||||Grayscale Grind Peak||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| LabelMapSmoothing ||no||yes and no||yes and yes|| 87.9% || 0 ||Dirk Padfield, Josh Cates, Ross Whitaker||||n/a||
|-
|style="color:white; background:black"|5Coal||style="width:33%"| ImageLabelCombine ||complete||yes and no||yes and no||style="background:red"| 7.5% || 50 ||Alex Yarmarkovich||||same||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| ResampleVolume2 ||no||yes and yes||yes and yes||style="background:red"| 46.8% || 0 ||Francois Budin||||Resample Scalar/Vector/DWI Volume||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| ZeroCrossingBasedEdgeDetectionImageFilter ||no||yes and no||yes and yes|| 62.5%|| 0 || Elliot Uvero||||n/a||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| FreesurferSurfaceSectionExtraction ||no||yes and no||yes and yes|| 60.0% || 62 || Sylvain Bouix||||n/a/||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| BRAINSDemonWarp ||complete||yes and no||yes and no|| style="background:red"| 0.0% || Unknown ||Hans Johnson, Greg Harris ||||same||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| BRAINSFit ||complete||yes and yes||yes and yes|| style="background:red"| 0.0% || Unkown || Eun Young Kim||||same||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| BRAINSMush ||complete||no||no|| style="background:red"| 0.0% || Unknown || Hans Johnson||||same||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| BRAINSResample ||no||yes and yes||yes and no|| style="background:red"| 0.0% || Unknown || Hans Johnson||||n/a||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| BRAINSROIAuto ||no||yes and no||yes and no|| style="background:red"| 0.0% || Unknown || Hans Johnson||||n/a||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| DiffusionTensorEstimation BatchMake ||no||yes and no||yes and no|| style="background:red"| 0.0% || Unknown || Lauren O'Donnell||||n/a||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| EMSegment BatchMake||complete||yes and yes||yes and yes|| style="background:red"| 0.0% || Unknown || Julien Jomier, Stephen Aylward, Brad Davis||||EM Segmenter batch||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| Gaussian Blur BatchMake ||complete||yes and yes||yes and yes|| style="background:red"| 0.0% || Unknown || Julien Jomier, Stephen Aylward, Julien Finet||||Gaussian Blur batch||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| RegisterImages BatchMake ||complete||yes and yes||yes and yes|| style="background:red"| 0.0% || Unknown ||Stephen Aylward, Julien Finet||||Register Images batch||
|-
|style="background:white"|7??||style="width:33%"| ResampleScalarVolume BatchMake ||complete||yes and yes||yes and yes|| style="background:red"| 0.0% || Unknown ||Julien Finet||||Resample Volume batch||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| Diffeomorphic Demons Algorithm ||no||no||yes and yes|| style="background:red"| 0.0% || Unknown ||Tom Vercauteren, Ender Konukoglu, Kilian Pohl||||n/a||
|-
|style="color:white; background:black"|5Coal||style="width:33%"| ResampleDTIVolume ||complete||yes and yes||yes and yes|| 37.0% || 0 ||Francois Budin||||same||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| Rician LMMSE Image Filter ||complete||yes and no||yes and yes|| style="background:red"| 0.0% || Unknown ||Antonio Tristan Vega, Santiago Aja Fernandez, Marc Niethammer||||same||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| Unbiased Non Local Means filter for DWI ||complete||yes and no||yes and yes|| style="background:red"| 0.0% || Unknown ||Antonio Tristán Vega, Santiago Aja-Fernandez||||n/a||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| Joint Rician LMMSE Image Filter ||complete||yes and no||yes and yes|| style="background:red"| 0.0% || Unknown ||Antonio Tristán Vega, Santiago Aja Fernández||||same||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| Extract Skeleton ||no||yes and no||no and yes|| style="background:red"| 0.0% || Unknown ||Pierre Seroul, Martin Styner, Guido Gerig, Stephen Aylward||||n/a||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| MRI Bias Field Correction ||complete||yes and yes||yes and yes|| style="background:red"| 0.0% || Unknown ||Sylvain Jaume||||same||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| N4ITK MRI Bias Correction ||no||yes and no||yes and yes|| style="background:red"| 0.0% || Unknown ||Nick Tustison, Andriy Fedorov||||same||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| ACPC Transform ||complete||yes and yes||yes and yes|| style="background:red"| 0.0% || Unknown ||Nicole Aucoin||||same||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| Mesh Contour Segmentation ||complete||yes and yes||yes and yes|| style="background:red"| 0.0% ||Unknown||Peter Karasev, Karol Chudy, Allen Tannenbaum||||same||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| Utah BSpline Deformable registration ||no||yes and no||yes and yes|| style="background:red"| 0.0% ||Unknown||Sam Gerber, Jim Miller, Steve Pieper, Ross Whitaker||||n/a||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| Calculate Volume Statistics ||no||no||no|| style="background:red"| 0.0% ||0||Tri Ngo||||n/a||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| Generate Connectivity Map ||no||no||no||style="background:red"| 0.0% || Unknown ||Tri Ngo||||n/a||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| ROI Tract Filter ||no||no||no||style="background:red"| 0.0% || Unknown ||Tri Ngo||||n/a||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| Stochastic Tractography Filter ||no||no||no||style="background:red"| 0.0% || Unknown||Tri Ngo||||n/a||
|-
|style="background:hotpink"|6Hazard||style="width:33%"| MIDAS Data and Slicer Tutorials ||no||yes and no||yes and no|| style="background:red"| 0.0% ||Patrick Reynolds, Stephen Aylward||||n/a||
|-
|}

<references/>

= Testing Partition =

Most Slicer modules have a '''GUI component''' and a '''Data Processing''' component.

Testing GUI components is still a challenge, so we will focus here on testing the '''Data Processing''' components. This can be done in most cases by partitioning the module into a GUI section and a Data Processing section, where the second one usually takes the form of a C++ class (although that is not a requirement).

The '''data processing''' section can be tested by using standard CTest/CMake mechanisms. Basically by adding ADD_TEST() entries to the CMakeLists.txt file of the module.

=Luis Ibanez' scoring system=

The following scoring will be applied to the '''data processing''' sections of all modules:

{|class="wikitable sortable labelpage labelpagetable" border="1" style="text-align:center"
|+ <big>Slicer 3.6 Quality Assurance Scoring</big>
|-
!Score!!Code Coverage!!Valgrind Errors!!Documentation!!Tutorial
|-
|style="background:gold"| '''1Gold''' || > 80% || 0 ||yes || yes
|-
|style="background:silver"| '''2Silver''' || > 70% || < 10 ||yes || yes
|-
|style="background:darkgoldenrod"| '''3Bronze''' || > 60% || < 50 ||yes || yes
|-
|style="background:darkorange"| '''4Clay''' || > 50% || < 100 ||yes || yes
|-
|style="color:white; background:black"| '''5Coal''' ||style="background:red"|< 50% || > 100 || yes || yes
|-
|style="color:white; background:hotpink"| '''6Hazard''' || unknown || unknown || no || no
|}

The code coverage and Valgrind error must be the ones reported on the Nightly Slicer Dashboard. Anecdotal data is not acceptable.