CCA:Atlases:Florins 2010 Hierarchy

From Slicer Wiki
Jump to: navigation, search
Home < CCA:Atlases:Florins 2010 Hierarchy

Contents

body

head

soft tissue of the head

  • skin of head
  • muscles of head
    • masticatory muscles
      • temporal muscle r/l
      • masseter muscle r/l
      • lateral pterygoid muscle r/l
      • medial pterygoid muscle r/l
    • facial muscles
      • frontal muscle
      • corrugator muscle
      • orbicularis occuli muscle r/l
      • levator angulis oris muscle r/l
      • orbicularis oris muscle
      • risorius muscle r/l
      • nasalis muscle r/l
      • mentalis muscle r/l
      • depressor labii inferioris muscle r/l
      • depressor angulis oris muscle r/l
      • buccinator muscle r/l
      • occipitalis muscle r/l
  • salivary glands
    • parotid glands r/l
    • sublingual glands r/l
    • submandibular glands r/l
  • lips
  • nose
    • nasal septum
    • nostrils r/l
  • tongue
  • soft palate
  • tonsils r/l
  • external ear r/l
  • middle ear r/l
  • internal ear r/l
  • eyeballs r/l

skull

  • frontal bone r/l
  • parietal bone r/l
  • temporal bone r/l
    • stapes r/l
    • incus r/l
    • malleus r/l
  • sphenoid bone r/l
  • ethmoid bone r/l
  • occipital bone
  • maxilla
  • zygomatic bone r/l
  • lacrimal bone r/l
  • vomer bone
  • palatine bone r/l
  • mandible

teeth

central nervous system

meninges

  • dura mater
  • arachnoid
  • pia mater

brain

  • CSF spaces
    • ventricles of brain
      • lateral ventricle r/l
      • third ventricle
      • cerebral aqueduct
      • fourth ventricle
    • subarachnoid space
  • brain parenchyma
    • gray matter of brain
      • telencephalon
        • cerebral cortex
          • frontal lobe r/l
            • superior frontal gyrus r/l
            • middle frontal gyrus r/l
            • inferior frontal gyrus r/l
            • orbital gyri r/l
            • straight gyrus r/l
            • precentral gyrus r/l
            • paracentral lobule r/l
            • frontal pole r/l
          • temporal lobe r/l
            • superior temporal gyrus r/l
            • middle temporal gyrus r/l
            • inferior temporal gyrus r/l
            • hippocampus r/l
            • parahippocampal gyrus r/l
            • temporal part of medial occipitotemporal gyrus r/l
            • temporal part of lateral occipitotemporal gyrus r/l
            • uncus r/l
          • parietal lobe r/l
            • postcentral gyrus r/l
            • superior parietal lobule r/l
            • inferior parietal lobule r/l
            • precuneus r/l
          • occipital lobe r/l
            • superior occipital gyri r/l
            • inferior occipital gyri r/l
            • gyrus descendens r/l
            • lingual gyrus r/l
            • occipital part of medial occipitotemporal gyrus r/l
            • occipital part of lateral occipitotemporal gyrus r/l
            • cuneus r/l
            • occipital pole r/l
          • insular lobe r/l
            • limen of insula r/l
            • long insular gyrus r/l
            • short insular gyri r/l
          • limbic lobe r/l
            • cingulate gyrus r/l
            • paraterminal gyrus r/l
            • indusium griseum r/l
            • olfactory bulb r/l
            • olfactory tract r/l
        • subcortical gray matter of telencephalon r/l
          • striatum r/l
            • nucleus accumbens r/l
            • caudate nucleus r/l
            • putamen r/l
          • pallidum r/l
            • globus pallidus pars externa r/l
            • globus pallidus pars interna r/l
          • septal nuclei
          • amygdaloid complex r/l
          • claustrum r/l
      • diencephalon r/l
        • thalamus r/l
          • thalamic nuclei r/l
        • subthalamus r/l
          • subthalamic nucleus r/l
        • hypothalamus
          • hypothalamic nuclei
          • mamillary bodies r/l
          • substantia perforata r/l
            • anterior substantia perforata r/l
            • posterior substantia perforata r/l
          • pituitary infundibulum
        • epithalamus r/l
          • habenula r/l
            • habenular nuclei r/l
          • pineal body
        • gray matter of mesencephalon r/l
          • red nucleus r/l
          • substantia nigra r/l
            • substantia nigra pars compacta r/l
            • substantia nigra pars reticularis r/l
          • superior colliculus r/l
          • inferior colliculus r/l
          • occulomotor nerve nucleus (CN III) r/l
          • trochlear nerve nucleus (CN IV) r/l
          • mesencephalic nucleus of the trigeminal nerve (CN V) r/l
          • periaqueductal gray matter
        • gray matter of metencephalon
          • gray matter of pons r/l
            • principal sensory nucleus of trigeminal nerve (CN V) r/l
            • motor nucleus of the trigeminal nerve (CN V) r/l
            • abducent nerve nucleus r/l
            • facial nerve nucleus r/l
          • cerebellar gray matter
            • cerebellar cortex r/l
            • subcortical cerebellar gray matter
              • dentate nucleus r/l
              • emboliform nucleus r/l
              • globose nucleus r/l
              • fastigial nucleus r/l
          • gray matter of myelencephalon (medulla oblongata)
            • spinal nucleus of the trigeminal nerve (CN V) r/l
            • cochlear nuclei (CN VIII) r/l
            • vestibular nuclei (CN VIII) r/l
            • superior salivatory nucleus r/l
            • inferior salivatory nucleus r/l
            • nucleus ambiguus r/l
            • dorsal nucleus of vagus nerve (CN X) r/l
            • solitary tract nucleus r/l
            • hypoglossal nerve nucleus r/l
    • cerebral white matter
      • association white matter tracts
        • U-fibers
        • superior longitudinal fasciculus r/l
        • inferior longitudinal fasciculus r/l
        • arcuate fasciculus r/l
        • uncinate fasciculus r/l
        • cingulum bundle r/l
      • projection fibers
        • corticospinal tract r/l
        • corticomesencephalic tract r/l
        • corticopontine tract r/l
        • corticobulbar tract r/l
        • optic radiation r/l
        • radiation of thalamus r/l
        • medial lemniscus r/l
        • lateral lemniscus r/l
        • superior cerebellar peduncles r/l
        • middle cerebellar peduncles r/l
        • inferior cerebellar peduncles r/l
        • optic chiasm
        • left optic tract r/l
        • right optic tract r/l
        • fornix r/l
        • mammillothalamic tract r/l
        • mamillotegmental tract r/l
        • thalamic fasciculus r/l
          • ansa lenticularis r/l
          • lenticular fasciculus r/l
      • commissural fibers
        • corpus callosum
        • anterior commissure
        • posterior commissure
    • cerebellar white matter

spinal cord

  • gray matter of spinal cord
    • anterior horn r/l
    • posterior horn r/l
  • white matter of spinal cord
    • anterior column r/l
    • lateral column r/l
    • posterior column r/l

endocrine system of brain

  • pituitary gland
    • adenohypophysis
    • neurohypophysis

neck

soft tissue of neck

skin of neck

muscles of neck

pharynx

larynx

  • thyroid cartilage
  • cricoid cartilage
  • epiglottic cartilage
  • arytenoid cartilages r/l
  • vocal cords r/l

thyroid gland

====parathyroid glands==== r/l

skeleton of neck

  • hyoid bone
  • cervical vertebral column
    • cervical vertebrae
      • first cervical vertebra
      • second cervical vertebra
      • third cervical vertebra
      • fourth cervical vertebra
      • fifth cervical vertebra
      • sixth cervical vertebra
      • seventh cervical vertebra

thorax

soft tissue of thorax

soft tissue of thoracic wall

Skin of thoracic wall
muscles of thoracic wall

contents of thoracic cavity

trachea
bronchi
  • main bronchus r/l
right lung
  • superior lobe of right lung
  • middle lobe of right lung
  • inferior lobe of right lung
left lung
  • superior lobe of left lung
  • inferior lobe of left lung
pleura
  • parietal pleura
  • visceral pleura
  • pleural cavity
heart
  • atrium r/l
  • atrial septum
  • ventricular septum
  • right ventricle of heart
    • papillary muscles of right ventricle of heart
    • chordae tendineae of right ventricle of heart
  • left ventricle of heart
    • papillary muscles of left ventricle of heart
    • chordae tendineae of left ventricle of heart
  • mitral valve
  • tricuspid valve
  • aortic valve
  • pulmonary valve
pericardium
  • pericardial cavity
esophagus
thymus
mediastinum

skeleton of thorax

  • thoracic vertebral column
    • thoracic vertebrae
      • first thoracic vertebra
      • second thoracic vertebra
      • third thoracic vertebra
      • fourth thoracic vertebra
      • fifth thoracic vertebra
      • sixth thoracic vertebra
      • seventh thoracic vertebra
      • eighth thoracic vertebra
      • ninth thoracic vertebra
      • tenth thoracic vertebra
      • eleventh thoracic vertebra
      • twelfth thoracic vertebra
  • ribs
    • first rib r/l
    • second rib r/l
    • third rib r/l
    • fourth rib r/l
    • fifth rib r/l
    • sixth rib r/l
    • seventh rib r/l
    • eighth rib r/l
    • ninth rib r/l
    • tenth rib r/l
    • eleventh rib r/l
    • twelfth rib r/l
  • sternum
    • manubrium
    • body of sternum
    • xyphoid process
  • clavicle r/l

abdomen

soft tissue of abdomen

soft tissue of abdominal wall

skin of abdominal wall
muscles of abdominal wall

contents of abdominal cavity

  • peritoneum
    • parietal peritoneum
    • visceral peritoneum
    • omentum
    • peritoneal cavity
      • bursa omentalis
      • rectouterine pouch
    • falciform ligament
    • mesentery
    • mesocolon
      • transverse mesocolon
      • sigmoid mesocolon
    • broad ligament of uterus
      • mesometrium
      • mesosalpinx
      • mesovarium
  • retroperitoneal space
  • stomach
    • cardia
    • fundus of stomach
    • body of stomach
    • pylorus
  • duodenum
    • duodenal ampulla
  • small bowel
    • jejunum
    • ileum
  • colon
    • cecum
      • ileocecal valve
      • appendix
    • ascending colon
    • transverse colon
    • sigmoid colon
    • rectum
    • anus
  • liver
    • capsule of liver
    • right lobe of liver
    • left lobe of liver
    • caudate lobe of liver
    • quadrate lobe of liver
    • ligamentum teres of liver
  • biliary tree
    • right hepatic duct
    • left hepatic duct
    • common hepatic duct
    • common bile duct
    • cystic duct
    • gallbladder
  • pancreas
    • head of pancreas
    • body of pancreas
    • tail of pancreas
    • pancreatic duct
    • islets of Langerhans
  • spleen
  • urinary system
    • right kidney
      • parenchyma of right kidney
        • cortex of right kidney
        • medulla of right kidney
    • right renal pelvis
    • left kidney
      • parenchyma of left kidney
        • cortex of left kidney
        • medulla of left kidney
    • left renal pelvis
    • right ureter
    • left ureter
    • urinary bladder
    • urethra
  • suprarenal glands
    • corticosuprarenal glands
    • medullosuprarenal glands
  • female internal genitalia
    • uterus
      • fundus of uterus
      • body of uterus
      • cervix
      • round ligaments
      • uterosacral ligaments
      • pubocervical ligament
    • fallopian tubes
    • ovaries
    • vagina
  • male internal genitalia
    • prostate
    • seminal vesicles
    • deferent ducts

skeleton of abdomen

vertebral column of abdomen

lumbar vertebral column
  • lumbar vertebrae
    • first lumbar vertebra
    • second lumbar vertebra
    • third lumbar vertebra
    • fourth lumbar vertebra
    • fifth lumbar vertebra
sacrum
coccyx

female external genitalia

vulva

  • vulval vestibule
  • hymen
  • major labia
  • minor labia
  • praeputium
  • clitoris
    • glans of clitoris
    • body of clitoris
      • corpus cavernosum of clitoris
    • prepuce of clitoris
  • Bartolin's glands

male external genitalia

penis

  • glans of penis
    • meatus
  • shaft
    • corpus cavernosum of penis
    • spongious body
  • prepuce of penis

scrotum

  • skin of scrotum
  • dartos layer
  • cremaster muscle
  • testicles
    • epididymis
    • spermatic cord

upper limb

shoulder

soft tissue of shoulder

  • skin of shoulder
  • muscles and tendons of shoulder
    • muscles of shoulder
    • tendons of shoulder

skeleton of shoulder

  • scapula

arm

soft tissue of arm

  • skin of arm
  • muscles and tendons of arm
    • muscles of arm
    • tendons of arm

skeleton of arm

  • humerus

elbow

soft tissue of elbow

  • skin of elbow
  • muscles and tendons of elbow
    • muscles of elbow
    • tendons of elbow

skeleton of elbow

  • elbow joint

forearm

soft tissue of forearm

  • skin of forearm
  • muscles and tendons of forearm
    • muscles of forearm
    • tendons of forearm

skeleton of forearm

  • radius
  • ulna

hand

soft tissue of hand

  • skin of hand
  • muscles and tendons of hand
    • muscles of hand
    • tendons of hand

skeleton of hand

  • wrist
    • scaphoid
    • lunate
    • triquetrum
    • pisiform
    • trapezium
    • trapezoid
    • capitate
    • hamate
  • metacarpus
    • metacarpal bones
      • right first metacarpal bone
      • right second metacarpal bone
      • right third metacarpal bone
      • right fourth metacarpal bone
      • right fifth metacarpal bone
      • left first metacarpal bone
      • left second metacarpal bone
      • left third metacarpal bone
      • left fourth metacarpal bone
      • left fifth metacarpal bone
  • phalanges of hand

lower limb

hip

soft tissue of hip

  • skin of hip
  • muscles and tendons of hip
    • muscles of hip
    • tendons of hip

skeleton of hip

  • hip joint
  • hip bone
    • ischium
    • ilium
    • pubis

thigh

soft tissue of thigh

  • skin of thigh
  • muscles and tendons of thigh
    • muscles of thigh
    • tendons of thigh

skeleton of thigh

  • femur

knee

soft tissue of knee

  • skin of knee
  • muscles and tendons of knee
    • muscles of knee
    • tendons of knee

skeleton of knee

  • knee joint

leg

soft tissue of leg

  • skin of leg
  • muscles and tendons of leg
    • muscles of leg
    • tendons of leg

skeleton of leg

  • tibia
  • peroneus

foot

soft tissue of foot

  • skin of foot
  • muscles and tendons of foot
    • muscles of foot
    • tendons of foot

skeleton of foot

  • ankle
    • talus
    • calcaneus
    • navicular
    • first cuneiform
    • second cuneiform
    • third cuneiform
    • cuboid
  • metatarsus
    • metatarsal bones
      • right first metatarsal bone
      • right second metatarsal bone
      • right third metatarsal bone
      • right fourth metatarsal bone
      • right fifth metatarsal bone
      • left first metatarsal bone
      • left second metatarsal bone
      • left third metatarsal bone
      • left fourth metatarsal bone
      • left fifth metatarsal bone
  • phalanges of foot

peripheral nervous system

cranial nerves

  • right olfactory nerve (CN I)
  • right optic nerve (CN II)
  • right oculomotor nerve (CN III)
  • right trochlear nerve (CN IV)
  • right trigeminal nerve (CN V)
  • right abducent nerve (CN VI)
  • right facial nerve (CN VII)
  • right intermediate nerve (CN VII b)
  • right vestibulocochlear nerve (CN VIII)
  • right glossopharyngeal nerve (CN IX)
  • right vagal nerve (CN X)
  • right accessory nerve (CN XI)
  • right hypoglossal nerve (CN XII)
  • left olfactory nerve (CN I)
  • left optic nerve (CN II)
  • left oculomotor nerve (CN III)
  • left trochlear nerve (CN IV)
  • left trigeminal nerve (CN V)
  • left abducent nerve (CN VI)
  • left facial nerve (CN VII)
  • left intermediate nerve (CN VII b)
  • left vestibulocochlear nerve (CN VIII)
  • left glossopharyngeal nerve (CN IX)
  • left vagal nerve (CN X)
  • left accessory nerve (CN XI)
  • left hypoglossal nerve (CN XII)

spinal nerves

nerve plexuses and intercostal nerves

  • cervical plexus
    • lesser occipital nerve
    • greater auricular nerve
    • transverse cervical nerve
    • supraclavicular nerve
    • ansa cervicalis
    • phrenic nerve
    • segmental nerve branches
      • right first cervical nerve
      • right second cervical nerve
      • right third cervical nerve
      • right fourth cervical nerve
      • left first cervical nerve
      • left second cervical nerve
      • left third cervical nerve
      • left fourth cervical nerve
  • brachial plexus
    • dorsal scapular nerve
    • suprascapular nerve
    • nerve to subclavius
    • lateral pectoral nerve
    • musculocutaneus nerve
    • axillary nerve
    • median nerve
    • ulnar nerve
    • radial nerve
    • medial cutaneous nerve of the arm
    • medial cutaneous nerve of the forearm
    • lower subscapular nerve
    • thoracodorsal nerve
    • medial pectoral nerve
    • upper subscapular nerve
    • long thoracic nerve
  • intercostal nerves
    • right first intercostal nerve
    • right second intercostal nerve
    • right third intercostal nerve
    • right fourth intercostal nerve
    • right fifth intercostal nerve
    • right sixth intercostal nerve
    • right seventh intercostal nerve
    • right eighth intercostal nerve
    • right ninth intercostal nerve
    • right tenth intercostal nerve
    • right eleventh intercostal nerve
    • left first intercostal nerve
    • left second intercostal nerve
    • left third intercostal nerve
    • left fourth intercostal nerve
    • left fifth intercostal nerve
    • left sixth intercostal nerve
    • left seventh intercostal nerve
    • left eighth intercostal nerve
    • left ninth intercostal nerve
    • left tenth intercostal nerve
    • left eleventh intercostal nerve
  • lumbosacral plexus
    • iliohypogastric nerve
    • ilioinguinal nerve
    • genitofemoral nerve
    • lateral cutaneous femoral nerve
    • femoral nerve
    • obturator nerve
    • accessory obturator nerve
    • sciatic nerve
      • common fibular nerve
      • tibial nerve
    • perforating cutaneous nerve
    • pudendal nerve
    • anococcigeal nerves

circulatory system

systemic arterial system

  • aorta
    • right coronary artery
    • left coronary artery
    • aortic arch
      • right brachiocephalic trunk
        • right subclavian artery
          • right vertebral artery
            • anterior spinal artery
            • posterior inferior cerebellar artery
            • basilar artery
              • anterior inferior cerebellar artery
              • pontine arteries
              • superior cerebellar artery
              • posterior cerebellar artery
          • internal thoracic artery
          • thyrocervical trunk
          • costocervical trunk
          • dorsal scapular artery
          • axillary artery
            • brachial artery
        • right common carotid artery
          • right external carotid artery
          • right internal carotid artery
            • right opthalmic artery
            • right anterior cerebral artery
              • anterior communicating artery
          • right middle cerebral artery
          • right posterior communicating artery
      • left common carotid artery
        • left external carotid artery
        • left internal carotid artery
          • see right internal carotid artery
      • left subclavian artery
        • see right subclavian artery
    • descending thoracic aorta
      • bronchial arteries
      • esophageal arteries
      • posterior intercostal arteries
    • abdominal aorta
      • inferior phrenic artery
      • celiac trunk
      • superior mesenteric artery
      • middle suprarenal artery
      • renal artery
      • gonadal artery
      • lumbar arteries
      • inferior mesenteric artery
      • median sacral artery
      • right common iliac artery
        • right external iliac artery
          • inferior epigastric artery
          • deep circumflex iliac artery
          • femoral artery
        • right internal iliac artery
          • right iliolumbar artery
          • right lateral sacral arteries
          • right superior gluteal artery
          • right obturator artery
          • right inferior gluteal artery
          • right umbilical artery
          • right uterine/deferential artery
          • right inferior vesical artery
          • right middle rectal artery
          • right internal pudendal artery
      • left common iliac artery
        • left external iliac artery
        • left internal iliac artery

systemic venous system

  • superior vena cava
  • inferior vena cava
  • azygos vein
  • hemyazygos vein
  • portal vein

pulmonary arterial system

  • right pulmonary artery
  • left pulmonary artery

pulmonary venous system

  • right superior pulmonary vein
  • right inferior pulmonary vein
  • left superior pulmonary vein
  • left inferior pulmonary vein

lymphatic system

lymphatic ducts

  • right lymphatic duct
  • thoracic duct

lymph node groups

  • cervical lymph nodes
  • supraclavicular lymph nodes
  • occipital lymph nodes
  • pre-auricular lymph nodes
  • infraclavicular lymph nodes
  • axillary lymph nodes
  • pectoral lymph nodes
  • epitrochlear/brachial lymph nodes
  • mediastinal lymph nodes
  • mesenteric lymph nodes
  • para-aortal lymph nodes
  • iliac lymph nodes
  • inguinal lymph nodes
  • femoral lymph nodes
  • popliteal lymph nodes

material

  • air
  • liquid

biological material

  • blood
  • cerebro-spinal fluid
  • urine
  • feces

tissue

  • gray matter
  • white matter
  • bone
  • cartilage
  • fat
  • connective tissue

pathology

  • tumor
  • edema
  • bleeding
  • necrosis
  • clot
  • embolism

foreign objects

  • surgical needle
  • probe

segmentation regions

  • background
  • unsegmented region
  • user defined regions
    • region 1
    • region 2
    • region 3
    • region 4
    • region 5
    • region 6
    • region 7
    • region 8
    • region 9
    • region 10
    • region 12
    • region 13
    • region 14
    • region 15
    • region 16