Slicer-3-6-FAQ
Back to Slicer 3.6 Introduction
Contents
- 1 Introduction
- 2 I have DICOM DWI images. What do I need to do to process them in Slicer?
- 2.1 DWI formats are not properly standardized (as of 2010). In many cases, vendors put important information about gradients into the private fields. Our DICOM to NRRD converter has an extensive library of such special cases. Convert your DWI images to a NRRD volume, before beginning the post processing.
- 2.2 Installation and configuration
Introduction
- This page contains frequently asked questions related to Slicer 3.6
I have DICOM DWI images. What do I need to do to process them in Slicer?
DWI formats are not properly standardized (as of 2010). In many cases, vendors put important information about gradients into the private fields. Our DICOM to NRRD converter has an extensive library of such special cases. Convert your DWI images to a NRRD volume, before beginning the post processing.
Question: I have streamlines from DTI and would like to find the subset which goes through a particular region Answer: The [Modules:ROISelect-Documentation-3.6|ROI selection module] in Slicer 3.6 allows to filter for streamlines which pass (or do not pass) through label map ROI's
Installation and configuration
Where do I download MediaWiki?
Click here to download the latest stable release of MediaWiki. Files are supplied in a .tar.gz archive. MediaWiki can also be obtained directly from our Subversion repository.
How do I install MediaWiki?
Installing MediaWiki takes between 10 and 30 minutes, and involves uploading/copying files, and running the installer script to configure the software - see Installation or the complete Installation Guide.
Quick installation guide can be found in the INSTALL file supplied in the distribution archive.
