Documentation/Nightly/Extensions

For the latest Slicer documentation, visit the read-the-docs.

Extensions by Category

Cat 2

• CarreraSlice Interactive Segmenter (Ivan Kolesov, LiangJia Zhu, Yi Gao, Peter Karasev, Patricio Vela, Allen Tannenbaum, Karl Fritscher, Steve Pieper )
• SurfaceReconstruction (Chenxi-Zhang David-Doria Arnaud-Gelas Michael-Kazhdan Matthew-Bolitho Hugues-Hoppe Jean-Christophe Fillion-Robin )
• SkullStripper (Xiaodong Tao)
• MABMIS (Xiaofeng Liu)
• SwissSkullStripper (Bill Lorensen)
• Cardiac MRI Toolkit (Alan Morris, Salma Bengali)
• PkModeling (Emma Zhu, Jim Miller)
• FacetedVisualizer (Harini Veeraraghavan, Jim Miller)
• Reporting (Andrey Fedorov, Nicole Aucoin, Steve Pieper) (work in progress)
• TCIA Browser (Alireza Mehrtash, Andrey Fedorov) (work in progress)
• SlicerRT (Csaba Pinter, Kevin Wang, Adam Rankin, Greg Sharp, Andras Lasso, Steve Pieper)
  • DICOM-RT import
  • DICOM-RT export
  • Contours
  • Dose volume histogram
  • Dose accumulation
  • Dose comparison
  • Isodose line and surface display
  • Contour comparison
  • Contour morphology
  • Subject hierarchy (integrated into Slicer trunk)
  • Modules from Plastimatch (Greg Sharp)
    • Plastimatch Automatic deformable image registration
    • Plastimatch LANDWARP Landmark
    • Plastimatch XFORMWARP
• SlicerIGT (Tamas Ungi, Adam Rankin, Andras Lasso, Junichi Tokuda, Laurent Chauvin)
  • CollectFiducials (Tamas Ungi)
  • CreateModels (Tamas Ungi, Matthew Holden)
  • OpenIGTLinkRemote (Tamas Ungi, Andras Lasso)
  • UltrasoundSnapshots (Tamas Ungi, Franklin King)
  • VolumeResliceDriver (Junichi Tokuda, Tamas Ungi, Laurent Chauvin)
  • PathExplorer (Laurent Chauvin, Junichi Tokuda)
• Matlab Bridge (Andras Lasso, Jean-Christophe Fillion-Robin, Kevin Wang)
• iGyne (Xiaojun Chen and iGyne Team)
• LongitudinalPETCT (Paul Mercea, Andrey Fedorov)
• DTIProcess (Francois Budin)
• DTIAtlasFiberAnalyzer (Francois Budin)
• FiberViewerLight (Francois Budin)
• DTIPrep (Francois Budin)
• DTIAtlasBuilder (Adrien Kaiser)
• IntensitySegmenter (Francois Budin, Pengdong Xiao, Beatriz Paniagua)
• ShapePopulationViewer (Alexis Girault)
• ModelToModelDistance (Francois Budin, Juliette Pera, Beatriz Paniagua)
• SPHARM-PDM (Beatriz Paniagua, Francois Budin, Martin Styner)
• TubeTK (Stephen Aylward, Jean-Christophe Fillion-Robin, Christopher Mullins, Michael Jeulin-L, Matthew McCormick)
• UKFTractography (Ryan Eckbo, Yogesh Rathi)
• TrackerStabilizer (Laurent Chauvin, Jayender Jagadeesan)
• ChangeTracker (Andrey Fedorov)
• SobolevSegmenter (Arie Nakhmani)
• QuickTools (Julien Finet)
  • Image Maker
• XNATSlicer
• ErodeDilateLabel (Junichi)
• ThingiverseBrowser (Nigel Goh)
• Virtual Fracture Reconstruction (Karl Fritscher, Peter Karasev)
• AirwaySegmentation (Pietro Nardelli)
• ModelClip (Jun Lin, Xiaojun Chen)
• SurfaceMirror (Jiaxi Luo, Ruqing Ye, Xiaojun Chen)
• Scoliosis (Franklin King, Tamas Ungi)
  • Spinal Curvature Measurement (Franklin King, Tamas Ungi)
• Port Placement (Luis G. Torres and Andinet Enquobahrie)
• Auto Port Placement (Luis G. Torres, Andinet Enquobahrie)
• Plus Remote (Franklin King, Tamas Ungi)
• Transform Visualizer (Franklin King, Andras Lasso, Csaba Pinter)
• WindowLevelEffect (Andrey Fedorov, Steve Pieper)
• PerkTutor (Tamas Ungi, Matthew Holden)
  • PerkEvaluator
  • TransformRecorder
  • WorkflowSegmentation
• SlicerToKiwiExporter (Jean-Christophe Fillion-Robin)
• GelDosimetry (Csaba Pinter)
• Multidimensional data (Andras Lasso, Matthew Holden, Kevin Wang)
• GyroGuide (Ruifeng Chen,Luping Fang, Qing Pan, Xiaolei Chen, Jiashu Zhang)
• MRI SNR Measurement (Babak Matinfar)
• OpenCAD (Vivek Narayan, Jayender Jagadeesan)
• Percutaneous Approach Analysis (Koichiro Murakami, Laurent Chauvin, Junichi Tokuda)
• Finsler Tractography (Antonio Tristan Vega, Demian Wassermann and Carl-Fredrik Westin)
  • Finsler Tractography
  • Finsler Backtracing
• CurveMaker (Junichi Tokuda)
• CBC 3D I2MConversion (Fotis Drakopoulos, Yixun Liu, Andrey Fedorov and Nikos Chrisochoides)
  • Body Centric Cubic Mesh
  • Mesh Compression
• Physics-Based Non-Rigid Registration (PBNRR) (Fotis Drakopoulos, Yixun Liu, Andriy Kot, Andrey Fedorov, Olivier Clatz and Nikos Chrisochoides)

Cat 3

• LesionSegmentation (Mark Scully)
  • LesionSegmentation->TrainModel (Mark Scully)
  • LesionSegmentation->PredictLesions (Mark Scully)
• IASEM (Bradley Lowekamp)
• Python debugger (Andras Lasso)

This page has been moved to read-the-docs.