Difference between revisions of "Documentation/Nightly/Extensions/SlicerRT"
(Added World Congress 2015 tutorial) |
(Updated module list and use case list) |
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*[[Documentation/{{documentation/version}}/Modules/DicomRtImport|DICOM-RT import]] | *[[Documentation/{{documentation/version}}/Modules/DicomRtImport|DICOM-RT import]] | ||
− | *[[Documentation/{{documentation/version}}/Modules/ | + | *[[Documentation/{{documentation/version}}/Modules/Segmentations|Segmentations]] |
− | |||
*[[Documentation/{{documentation/version}}/Modules/DoseVolumeHistogram|Dose volume histogram]] | *[[Documentation/{{documentation/version}}/Modules/DoseVolumeHistogram|Dose volume histogram]] | ||
*[[Documentation/{{documentation/version}}/Modules/DoseAccumulation|Dose accumulation]] | *[[Documentation/{{documentation/version}}/Modules/DoseAccumulation|Dose accumulation]] | ||
*[[Documentation/{{documentation/version}}/Modules/DoseComparison|Dose comparison]] | *[[Documentation/{{documentation/version}}/Modules/DoseComparison|Dose comparison]] | ||
*[[Documentation/{{documentation/version}}/Modules/Isodose|Isodose line and surface display]] | *[[Documentation/{{documentation/version}}/Modules/Isodose|Isodose line and surface display]] | ||
− | *[[Documentation/{{documentation/version}}/Modules/ContourComparison| | + | *[[Documentation/{{documentation/version}}/Modules/ContourComparison|Segment comparison]] |
− | *[[Documentation/{{documentation/version}}/Modules/ContourMorphology| | + | *[[Documentation/{{documentation/version}}/Modules/ContourMorphology|Segment morphology]] |
*[https://subversion.assembla.com/svn/slicerrt/trunk/SlicerRt/src/BatchProcessing/ Batch processing scripts] (currently only one is available for command-line conversion of RTSS to volume nodes) | *[https://subversion.assembla.com/svn/slicerrt/trunk/SlicerRt/src/BatchProcessing/ Batch processing scripts] (currently only one is available for command-line conversion of RTSS to volume nodes) | ||
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**[[Documentation/{{documentation/version}}/Modules/SubjectHierarchy|Subject hierarchy]] | **[[Documentation/{{documentation/version}}/Modules/SubjectHierarchy|Subject hierarchy]] | ||
**[[Documentation/{{documentation/version}}/Modules/DeformationFieldVisualizer|Transform visualizer]] | **[[Documentation/{{documentation/version}}/Modules/DeformationFieldVisualizer|Transform visualizer]] | ||
+ | **[[Documentation/{{documentation/version}}/Modules/DicomRtExport|DICOM-RT export]], as [http://www.slicer.org/slicerWiki/index.php/Documentation/Labs/DICOMExport improved DICOM export function] | ||
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{{documentation/{{documentation/version}}/extension-section|Use Cases}} | {{documentation/{{documentation/version}}/extension-section|Use Cases}} | ||
* Comparison of dose maps and dose volume histograms from various treatment planning systems | * Comparison of dose maps and dose volume histograms from various treatment planning systems | ||
− | * Evaluation of the effect of image-based non-rigid patient motion compensation | + | * Evaluation of the effect of different adaptive techniques (IGRT, image-based non-rigid patient motion compensation, etc.) |
+ | ** Calculate couch shift parameters for patient setup correction in IGRT | ||
* Dose accumulation with motion compensation | * Dose accumulation with motion compensation | ||
− | |||
* Testing of treatment planning algorithms | * Testing of treatment planning algorithms | ||
+ | * Calculation of PTV margin | ||
+ | * Proton dose calculation | ||
+ | * Gel dosimetry analysis | ||
+ | * Treatment plan similarity measurement in the cloud | ||
+ | * Batch structure set conversion | ||
| [[File:SlicerRt_Montage.jpg|1024px|SlicerRT highlights]] | | [[File:SlicerRt_Montage.jpg|1024px|SlicerRT highlights]] |
Revision as of 21:20, 2 July 2015
Home < Documentation < Nightly < Extensions < SlicerRT
For the latest Slicer documentation, visit the read-the-docs. |
Introduction and Acknowledgements
Authors: Csaba Pinter (PerkLab, Queen's University), Andras Lasso (PerkLab, Queen's University), Kevin Wang (Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto)
Contributors: Greg Sharp (Massachusetts General Hospital), Steve Pieper (Isomics)
Contacts:
- Csaba Pinter, <email>csaba.pinter@queensu.ca</email>
- Andras Lasso, <email>lasso@cs.queensu.ca</email>
- Mailing list, <email>slicerrt@alerts.assembla.com</email> (need to register to Assembla using the email address from which the email is sent)
- How to report an error
Website: slicerrt.org
License: Slicer license
Download/install: install 3D Slicer, start 3D Slicer, open the Extension Manager, install the SlicerRT extension (see more details on the download page)
Extension Description
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Modules
Use Cases
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Tutorials
- World Congress 2015 tutorial (recommended)
- Summer NA-MIC week 2013 tutorial
- ECR 2013 - Medical University Vienna workshop
- Workshop material: download from NA-MIC.org
- RSNA 2012 tutorial
- Tutorial description: SlicerRT wiki: Slicer tutorials at RSNA 2012
- Sample data: download SlicerRT ART dose verification data from Midas server
- Summer NA-MIC week 2012 tutorial
Similar Extensions
- Plastimatch: SlicerRT and Plastimatch are complementary software libraries. Plastimatch focuses on delivering new computational methods radiotherapy, while SlicerRT aims for providing an easy-to-use interface for a wide range of stable, well-tested radiotherapy related features. SlicerRT uses Plastimatch internally for certain operations.
- Gel Dosimetry: Slicelet facilitating a streamlined workflow to perform gel dosimetry analysis for commissioning linacs and evaluating new dose calculation procedures
References
How to cite
Please cite the following paper when referring to SlicerRt in your publication:
C. Pinter, A. Lasso, A. Wang, D. Jaffray and G. Fichtinger, "SlicerRT – Radiation therapy research toolkit for 3D Slicer", Med. Phys., 39(10) pp. 6332-6338, 2012
@ARTICLE{Pinter2012, author = {Pinter, C. and Lasso, A. and Wang, A. and Jaffray, D. and Fichtinger, G.}, title = {SlicerRT – Radiation therapy research toolkit for 3D Slicer}, journal = {Med. Phys.}, year = {2012}, volume = {39}, number = {10}, pages = {6332-6338}, }